Phage RBP Database

Genbank accession

AWN05305.1 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,88

Seq2Symm

C3 confidence 0,994

C3	0,994
C2	0,009
C1	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MARNLFGGSAADVAEDIDGARVAGAEGTVWDGPSSGAAQITDLLDENSQPTQNLTADSQGMVHHFYGPDNVTLLYVDFGAGRVAMVPVNTSTDLANHLNATDPHGTKAGALAEINAQRGVAGGFSTLGPDGKVLPAQLPSSLGEDGEGSVDWLSVKSASYGAIGDGVQDDTAAIQNAIDAAGYGGVVYFPKGVYKVSQPLDLPRGVTLLGSHSNLMVGPGMVGDEWPCYLQAAPTFTTGAMINIIGEDDGDHPALNGEQRIFNLMLDGSKVSGWGLDGIYSRGNVQNVVLRDVCIRQMPNNGIVTASVGTTWPYSWRLHSVMVDNCHVNGMVFEGNTDLTLEDCQVIGSWSSGFKLINCANTLVTHSRAEWCGNYGFHITGGWGNWPGSGSMTLTGCSTDRNGWDGVRVDASGNGAFLIQGLMTRRDGRNGGAGGGGYAGLRLSNQAPVVVTGHQNYVGSDDGGTANTSPDYGVSISGARDVQYTGGYLHGLLGTINDDGTNTRVIIGPNTSGVVGNNYAEDRKPITAQVGPVQLTDLAAVGRALGLAHPGDHGLKAWAYDPVMATGTLGVTGGVVYLSAMYIPVKTSVSKILWHCSSAASGVTAGSNFVGLYTSAGVRLASVGIDGDVTSTGAKQTTIPATALEPGMYWVGFVFNATTPPAMARTTGIASFTALVNANLSGASLRFASQLTGQTTLPANLTPGNNNPAASYWAAVS

Physico‐chemical properties

protein length:	717 AA
molecular weight:	73991,47550 Da
isoelectric point:	4,90591
aromaticity:	0,07392
hydropathy:	-0,05411

Domain architecture

AWN05305.1

1 717 aa

STR 152–530 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011050
STR

IPR011050

IPR012334
STR

IPR012334

IPR024535
ENZ

IPR024535 IPR006626 IPR039448

IPR006626
Unmapped

IPR006626 IPR006626 IPR006626

AWN05305.1

1717 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1435
ATT

DC_1435 DC_0685 DC_0770

AWN05305.1

1717 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011050	STR	IPR011050	152	492	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	154	530	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR024535	ENZ	DC_0410	158	218	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits
IPR006626	Unmapped	-	261	283	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	330	414	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	336	358	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	359	381	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	389	411	InterPro	Parallel beta-helix repeat	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AWN05305.1

1 717 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	167	167	0,9865
Central domain	168	533	367	0,9864
C-terminal	534	717	183	0,9907

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Streptomyces phage Ibantik [NCBI] · taxon 2182397

Uroviricota Caudoviricetes Ibantikvirus Ibantikvirus ibantik

Host

Streptomyces lividans [NCBI] · taxon 1916

Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces lividans

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)