Phage RBP Database

Genbank accession

AVO24697.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,89

Seq2Symm

C3 confidence 0,251

C3	0,251
C1	0,051
I	0,048

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAVTAVLFETSGTRGNRLDPDVRDEIEALAPGLETGEVTTDKIANDAVTREKIDAGAVGSVELDDDAVKAQHIDDGAVGTPALAAGAVTSEKTGIGVVTAEDASGNPVEVKQVYMTVAQYNALATKDPNTDYYLS

Physico‐chemical properties

protein length:	135 AA
molecular weight:	13968,18950 Da
isoelectric point:	4,15325
aromaticity:	0,03704
hydropathy:	-0,19037

Domain architecture

AVO24697.1

1 135 aa

RBD 113–132 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR056923
RBD

IPR056923

AVO24697.1

1135 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1261
STR

DC_1261

AVO24697.1

1135 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR056923	RBD	DC_0181	113	132	InterPro cluster	Minor tail protein gp31, C-terminal	C-terminal	High	Text match	208 proteins / 208 hits

Proteins with similar domain architecture

Phage

Mycobacterium phage BatteryCK [NCBI] · taxon 2094129

Uroviricota Caudoviricetes Pegunavirus Pegunavirus oline

Host

Mycobacterium smegmatis str. MC2 155 [NCBI] · taxon 246196

Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycolicibacterium Mycolicibacterium smegmatis

Genbank protein accession

AVO24697.1 [NCBI]

Genbank nucleotide accession

MG962363.1 [NCBI]

CDS location

range 36572 -> 36979
strand +

CDS

ATGGCCGTCACCGCTGTCCTGTTTGAAACCTCAGGCACCCGAGGTAACCGCCTCGACCCCGATGTGCGTGACGAGATTGAGGCGCTCGCGCCGGGCCTTGAGACCGGCGAGGTCACGACCGACAAGATCGCCAATGACGCGGTCACGCGCGAGAAGATCGACGCGGGCGCGGTGGGGTCGGTCGAGCTCGATGACGACGCGGTCAAGGCGCAGCACATCGATGACGGGGCGGTGGGGACACCAGCGCTCGCGGCAGGCGCGGTCACCTCAGAGAAGACCGGCATCGGTGTGGTCACCGCCGAGGATGCCTCGGGAAACCCCGTCGAGGTCAAGCAGGTCTACATGACCGTGGCGCAGTACAACGCGCTGGCGACAAAAGACCCGAACACGGATTACTACCTGAGCTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)