Phage RBP Database

Genbank accession

GENB_af2e05f20084 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

Seq2Symm

C3 confidence 0,995

C3	0,995
D3	0,011
C1	0,010

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MEETIIIKETDGWINVLDYGVCRDESEDVSSRVQKIITAAPEDSIIYFPSGKYLFTSGIEINKRLTLCGDAYFRSNNPDNEFFHSGATQFSCKFNKEDVKNGTIQSFAVITVKGVKHCIKSISFQSDSCYRPEDDENDKENNSHYPPANGEPGLHHKINFTHEGKSISAIVCDDVSEGSGHYENLDFGGFAEIALEMPNNSTANDITIFPCNRGISAGENSIITNGKIWGCTYGMEISTGTFINGMRVEEVGKVAIDSIGKGSNFITNITIDQCGYCGFKFDSISNTQISGNISRCGQYYFNFTYEDYLKLDDKDRIEEAYSLFYGNSIDSSNITITNTNVDYWEDAGEGEFNNGDLTFSPHKVYLIKALETKNVLLRCFIDATDMVIESQKGNLIYNNKTQTVIFHDGELSSINGIGISEEDYGDKIKIKKGEMYINGNMKMYSPQINDILTTEKNTSDEVAKNYGGKWQKIGEKSEPNITIQYYKMIEK

Physico‐chemical properties

protein length:	491 AA
molecular weight:	54993,54900 Da
isoelectric point:	4,75716
aromaticity:	0,10591
hydropathy:	-0,49654

Domain architecture

GENB_af2e05f20084

1 491 aa

ENZ 13–236 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR024535
ENZ

IPR024535

GENB_af2e05f20084

1491 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2225
RBD

DC_2225

GENB_af2e05f20084

1491 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR024535	ENZ	DC_0410	13	236	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits

Proteins with similar domain architecture

Phage

Clostridioides phage HGP05 [NCBI] · taxon 2976353

Uroviricota Caudoviricetes Clostridioides phage HGP05

Host

Clostridioides difficile [NCBI] · taxon 1496

Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Clostridioides Clostridioides difficile

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)