Protein

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Genbank accession
YP_010681674.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MATSIGRGQLTLTDLNDVIASNVAPENPVEGSLWFNKEDNSLYVYNNGSWILASPELQIGGRNLVINSTFNNGMTDWTNSYEVLTPEDDKPTSSILRIASVGYTSARYAQTWSREIPMSINPNNTYTLSFDIKIDDLTALADTDVIFSIRTFAVKGKTSSSDSAWEKTIKKSDIANKITNGKWYRHCVTFQPTASEYIRVSPYLTMNGVVYYREIKLEVGNTATDWTPSPEDVATKLSSITETLGNMANDNIIDYSERQVIKDKLTNILGYVIVDNISELPTSTVNDQATNGKGSFYFVRKNATMSGLPTSNEKYIAVETQYNNLKIYLESMSPKPWDVSEANKGQIITIDKSVFRDKWLQYYKAEQDLANATADQLKKNVDNVSVGGTNWASNGNFEYDIRKSLWASSYVGDIHEIVDISTETPPFHYAYHVRQDTNGLAGIFSPSIWKDESANAMLNKEITISFWLKYQNITQGISAINAGRFGELIIVGENDNGEKKYLYLKVNFKDIITGSNMTWEKYSSTARIVMPDGATKITGINFKHGIENGTGEFWTTGIKIEIGNKATDWSQCPLDIQARLTDVEFKVTPDGIFTQVSQSQAFNAAMTSKQDLRDYSFENGVSLWKKDKELTTALEGTIQNGQGNFGSNAIQLTGDSSGFYGKMIPVNTNHVYKVTFRVKQLVDPTTAGLSKVYAGVAAYDANKQPLVTQTFGLHRYCAVHDQPITVADGWQEYTGTISLEGDDDYSQFITGTKYAVPVFIVNNSGGDGVALVDYCTLEDISEVEALGAEIDTVKQSITPSGITTVISQSDFYNQYLNDLEGKADSSKLGDYATQDQLKEVQDGIGGAINDGIANLNIDQVYATKQELQQTATDFTAKFTATGGLNLIKNSIGYADFDFWTGVDGNMQTIQNTSLDSLGFGSGFYSPVGTTSSHAIQEIVVVPDQTYSLGFYMDKTVDNTSSSWAGIDILNEDGSILQFTGIGTNGGTTSGWQSFSYTFTPTTATIKIRITIGGYASATLTGLMLNIGDIPLQWSLATGETYNTNVRLDINGIRVSQLETLSDGTKQEVGYTQITPDEFAGYYDLDGTGNFDKVFYLNGDETVTKKFIATDEISMASLKIVPVTSTNYNGWAFVPKR
Physico‐chemical
properties
protein length:1136 AA
molecular weight: 125050,60030 Da
isoelectric point:4,65389
aromaticity:0,10475
hydropathy:-0,32562

Domains

Domains [InterPro]
DC_0835
STR
2–1126
DC_0835
IPR008979
STR
58–133
IPR008979 G3DSA:2.60.120.260 G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
61–219
G3DSA:2.60.120.260
YP_010681674.1
1 1136
Architecture
STR
STR 2-1126 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010681674.1
1 1136
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,5948
Central domain 143 392 251 0,1954
C-terminal 393 1136 743 0,0886
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-392
C-terminal
393-1136

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BsuS_PJN02
[NCBI] 		2920374 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010681674.1 [NCBI]
Genbank nucleotide accession
NC_071050 [NCBI]
CDS location
range 58429 -> 61839
strand +
CDS
ATGGCGACAAGTATTGGTCGTGGTCAATTAACATTGACAGATTTAAATGATGTTATTGCTTCTAATGTTGCACCAGAAAATCCAGTAGAAGGAAGTTTATGGTTTAACAAAGAGGATAATTCATTATACGTATATAATAATGGTTCTTGGATTCTGGCATCACCTGAGTTACAAATTGGAGGAAGAAACCTCGTTATAAACTCTACATTCAATAATGGAATGACAGATTGGACGAATAGTTATGAGGTTTTGACACCAGAAGATGACAAACCTACATCGAGTATTCTCAGAATAGCATCAGTAGGGTATACATCAGCTAGATATGCTCAAACATGGTCAAGAGAAATTCCAATGAGCATAAATCCAAACAATACATATACATTGTCTTTTGATATAAAAATTGATGATTTGACTGCTCTGGCTGATACGGATGTTATATTTTCGATTAGGACATTTGCAGTAAAAGGAAAAACTTCTAGCTCAGATTCAGCATGGGAAAAAACTATTAAAAAGAGTGATATTGCGAATAAGATAACAAACGGTAAATGGTATAGACATTGTGTAACATTTCAGCCTACTGCATCGGAATATATAAGAGTTTCCCCATATCTAACAATGAATGGCGTTGTTTATTATAGAGAGATAAAGTTGGAGGTTGGTAATACAGCCACAGACTGGACACCTTCGCCAGAAGACGTAGCAACTAAGTTGTCATCAATTACAGAAACTCTTGGTAATATGGCGAATGACAATATTATAGATTACAGTGAAAGACAAGTAATCAAAGATAAATTAACGAATATCCTTGGTTATGTGATTGTAGACAATATATCAGAACTACCTACTTCAACAGTAAATGATCAAGCAACAAACGGTAAAGGCTCTTTTTATTTTGTAAGAAAAAATGCTACGATGTCTGGTTTACCAACATCGAATGAAAAATACATAGCTGTTGAAACTCAATATAATAATTTAAAAATATATTTAGAATCTATGTCTCCTAAACCTTGGGATGTATCAGAAGCGAATAAAGGTCAAATTATTACGATTGACAAGTCTGTATTTAGAGATAAATGGTTGCAATATTATAAAGCAGAACAAGATTTAGCCAACGCAACAGCAGATCAGTTAAAAAAGAATGTTGACAATGTTTCAGTTGGTGGAACTAACTGGGCAAGCAATGGTAACTTTGAATATGATATAAGGAAATCATTATGGGCTAGTAGCTATGTTGGAGACATACATGAAATTGTAGATATTTCAACTGAAACACCGCCTTTTCATTATGCTTATCATGTAAGACAAGACACGAATGGGTTGGCAGGGATATTTTCTCCGTCAATTTGGAAAGATGAATCAGCAAATGCTATGCTAAACAAAGAGATAACTATTTCATTCTGGTTAAAATACCAAAATATTACACAGGGTATAAGTGCAATTAATGCAGGAAGATTTGGAGAATTAATTATTGTTGGTGAAAATGATAATGGTGAAAAGAAATACCTTTATTTAAAGGTGAACTTCAAAGATATAATAACTGGAAGCAACATGACATGGGAAAAATATAGCTCAACAGCAAGAATTGTAATGCCTGATGGGGCAACAAAAATAACTGGTATCAATTTTAAACATGGAATTGAAAATGGAACAGGTGAGTTTTGGACTACTGGTATTAAAATTGAAATTGGGAACAAAGCTACTGATTGGTCTCAGTGTCCTCTAGATATTCAAGCAAGACTTACGGATGTAGAATTTAAAGTAACACCAGATGGTATCTTCACACAGGTCTCACAGTCGCAAGCATTTAATGCGGCAATGACAAGCAAGCAAGATTTACGTGATTACAGCTTTGAAAATGGAGTATCACTTTGGAAAAAAGATAAAGAATTAACAACAGCACTTGAAGGAACAATTCAGAATGGTCAAGGTAACTTTGGTAGCAATGCTATTCAACTAACAGGTGACTCATCGGGATTCTATGGAAAAATGATTCCTGTAAACACTAATCACGTTTATAAAGTAACGTTTAGAGTTAAACAGTTAGTTGACCCTACAACAGCAGGATTATCAAAAGTTTATGCGGGGGTTGCGGCGTATGATGCAAACAAACAGCCACTTGTCACTCAAACATTTGGTCTCCATAGGTATTGTGCAGTTCATGATCAACCTATTACCGTAGCAGATGGATGGCAAGAGTATACAGGCACAATCTCTCTAGAAGGCGATGATGACTATAGTCAGTTTATAACAGGAACAAAATATGCAGTTCCAGTATTCATTGTCAATAACAGTGGTGGAGATGGTGTAGCTCTAGTTGATTATTGTACATTAGAGGATATAAGTGAAGTTGAAGCCCTTGGTGCAGAAATTGACACTGTTAAACAATCAATTACACCGTCTGGTATTACAACTGTAATTTCTCAATCAGACTTTTATAACCAATACTTAAACGATCTTGAAGGGAAAGCAGATTCAAGTAAGTTGGGAGATTATGCTACACAAGATCAATTAAAAGAAGTTCAAGATGGTATTGGTGGAGCGATTAATGATGGCATTGCAAATCTAAACATTGATCAAGTTTACGCTACCAAACAAGAATTACAACAGACTGCAACAGATTTTACAGCAAAGTTCACAGCAACAGGTGGATTGAACTTAATTAAAAACTCAATTGGATACGCTGATTTCGACTTCTGGACAGGAGTCGATGGAAATATGCAAACCATCCAAAATACGTCACTAGATAGCTTAGGATTTGGTAGTGGATTTTATTCTCCTGTAGGAACAACATCATCCCATGCGATACAAGAAATAGTAGTTGTTCCAGATCAAACATACTCTCTCGGTTTCTATATGGATAAAACAGTGGATAATACTAGTAGTTCTTGGGCTGGTATTGATATCTTAAATGAAGATGGTAGTATTCTTCAATTTACAGGAATAGGAACTAATGGAGGCACTACTAGTGGCTGGCAATCGTTTTCATACACTTTTACACCAACAACTGCAACTATAAAAATTAGAATCACAATTGGAGGATATGCCTCGGCAACATTAACTGGTTTAATGCTGAACATCGGAGACATACCTTTACAATGGTCGTTAGCAACTGGTGAAACATATAATACAAACGTAAGATTAGATATAAACGGTATCAGAGTTTCACAACTGGAAACGCTTTCTGACGGAACGAAGCAAGAAGTTGGCTACACCCAAATCACCCCAGATGAATTTGCAGGATACTATGATCTAGATGGAACTGGAAACTTTGATAAAGTGTTTTATCTAAATGGTGATGAAACAGTAACAAAGAAATTTATTGCAACGGATGAAATATCTATGGCTAGTTTAAAGATAGTACCTGTAACTTCAACTAATTATAATGGGTGGGCGTTCGTTCCCAAGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6754f5f1677bf293c5608a2449e358bfd521167ff22d86edd744b2a4a42c5518
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2830
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50