Phage RBP Database

Genbank accession

BAW98403.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

Seq2Symm

C3 confidence 0,718 truncated

C3	0,718
C1	0,038
C2	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MATDNDWGDDFLDGDFDFDYDFDGNKDQGFLKSVSKGFFSSLKSNTVGDTDAKIKTLRRILPSSFGTTFNFYRDLDRRKKEAFKEFKENSAELMGDLAFLSGSLSESLRDRLPNKIVDGLDEFSKKDFSDWEKEGEYRDPGLSMESVTGDMEQQMLEALEAQSSITVEATDTMTRVMSSIGAKQLSAGLQNNDQLYEVNANLRRLYEYQMNVQAKREAMKLNLMTRNFLTSAKYYKFMEASQHRLVRELKDITKNTAMSEYEKTSAIQAAKSNIRDGILQTTLARTGGFGEALSSIISKDSVNEGLSTFGQIVGDLRFATEMSQGSGINAGEMIGSMLGQYVVEKGPEFLGTPAGKKMVNKLRLRYPEQAKKFDEMYKTLTEFGDTLSYSTKALGSVMGRHYQETGMMDLPDQTYEEYLEELPADKDPMPKALWATIRKATKAAGGAFNLIGENYQESQGSFYQIQEKSLASLKDVSVWSIHDSRSLTEEIPTLLSEIHNSIEKIRTGDDNASKLRYDYRTSRVTTTDSLNKQVERIVTPAWELNSYADTARSIAKDLDKDGTLSKEALDALSLRLARESDKGNIFNPYDYIRMQTDEYLNEDHAKEIDELMRSRFQIKEEDIARTQENTLDGLMARLMVPTAEGKELLHRLSERTESLKNYTPDVSKKIDLIRNLGLDEGLKSSGYVMVDEKTNKEYINQELIWKQLHNQITGKGLNLELPKVDIHNPTDTRLELGRRSRYTPTPLNNSQTPPSFSDGLSSSLPSLPPFQEEVSGVLSNIMDTLVEIQNNTKVLEAIHGKDQSGLSLNLEPMLDLMTTNNSTLAEISSTQLEQLAVLRKLKAVTTIGTEGLGDGEVTPEKQQEEKEKRSLIERLRAIVPADVFNKGVEALIANKPMVLGGLLGGLGVTAMTNPKAAALLAGGAAVATVYGKLNHLANSGSAPGEDEDLYDEEGNEVLYASKKNAGDYYDQASRKVIKSWKDVKGTVIDMSAGASEIAASAKRLGGKLFGPDGREVVLEGVHRLKAFVSKTYKAIDPVGKAKQLFEAARTEVDQLNVYLKGDSDPVLTRRGFKNGWYYDAEGNEIKGWRDIKGPVYDQNGDELISMEDLKAGLHTVGGVTLDSLSSAGKSFGKMLSKGSNWLQTEGRERLGSKILGQEVHLDRTGGKYEPITERLDSIYALVAKHWGYDDKIPMSEKVGPKIKAQMDKLTEDDDADVTPDKPGIRLNSLADKIRRKKEAKRAQFQDSVIDIADTLKPKDKDGKPKKDGGIFGSLLGMAGGGLFAMLKKFLGLGISGFSSMMKLNGTIAKGLFSLGKVLTGALLGKRAKDGVEDIVDGMDGSGERRKGGKGKRGRGRFPRMGKMGGMTKLGLGAGLMIGGDMALDFARDSLDPEEGSVTDKLLDYSSVGLDVAGLGMTASAIAGMAGTSLGGIAAAAAPLLLNPITLGVAGVGLVGYGAYKYFSSSDLTTQQKLRMAQYGIDAQHEELINEVLKLEAQLENYVSINGDQANFTETTPFNKILSPFFASRKTQQGLQDGVTWFGKRFKPVFLSYLSAMRTLNCNGFKEFDQSKNLNVAIIAKEANQNVMNVNPNPYRIQVWISPDVYALDYADTMAQVNRYLEEFKKDNDKTNMFKKLPEDLMIQNTETQIKENEQKGMLSSAWDKLTGNYVDQDKQDKLDTWFKQPEIIKDIDVSDMLPGDKPVAIITAFRLAAYGNDENMPWRVEGVLKLERWMESRMAFIGGKAQFTGTDEEFWKAFAMTFRITSKRGREMTLRWFNYRFLPVFTAWFETCRTQRGGVPSKVWRALSATAKFRFARRVSEMTVLIDERVRAVFEIDEAPFEGERSSGMSTKAKRLLTALEVKANEAKIKDPELERTLTQPDKIKDNSVYAPAPGTMTADPKANPDFQALRGGIATPEEMRNNRGPHGRKKREQQWARNQLSGELDQINVDTSQKYDAGAELKPGNDRGVSLNKDQMVKVLIQEMVKRGHSDPREIAEMLALTDYETGGYKATAENMRYSNAQRARNIFRKLKKFNIAQVEDLIRRGPVAFANAVYNGWLGNTDSENDGWLYRGRGLVQLTGKDNYEKAGADLGIDIVNNPRMVSEDPETMAKTAIWFYENNPQMRSIKHHGDFAFAARGLNGGKALPGMDKREALYNQYLEDLMQGELTKDMGTGEEEAPKEDMPALPEVPPMLAALPKERLEKEEKSAMAPKPIPKPSLDDAPAQATAAVKETKAPVTKTPTTPPQAPTLMDDRPLPDLAKAKVPEKLAPPEPVKVEADVKLKPETEAALSGQAKILAQILNAINEGNNQAARQRQPSVNPF

Physico‐chemical properties

protein length:	2324 AA
molecular weight:	257695,05160 Da
isoelectric point:	5,75940
aromaticity:	0,07272
hydropathy:	-0,55336

Domain architecture

BAW98403.1

1 2324 aa

RBD 1974–1985 · STR 1986–2164 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil G3DSA:1.10.530.10

IPR023346
STR

IPR023346

PTHR22595
Unmapped

PTHR22595

IPR000726
ENZ

IPR000726

BAW98403.1

12324 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0124
STR

DC_0124 DC_1114

BAW98403.1

12324 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	1484	1504	Coils	Coil	-	-	-	-
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	1974	2164	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR023346	STR	IPR023346	1986	2164	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
PTHR22595	Unmapped	-	1993	2164	PANTHER	CHITINASE-RELATED	-	-	-	-
IPR000726	ENZ	DC_0328	2069	2124	InterPro cluster	Glycoside hydrolase, family 19, catalytic	C-terminal	High	Text match	27 proteins / 27 hits

Proteins with similar domain architecture

Phage

Vibrio phage pTD1 [NCBI] · taxon 1938577

Uroviricota Caudoviricetes Chimalliviridae Tidunavirus Tidunavirus pTD1

Host

Vibrio parahaemolyticus [NCBI] · taxon 670

Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)