Protein

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Genbank accession
YP_004327465.1 [GenBank]
Protein name
phage associated protein
RBP type
TSP
Evidence RBPdetect
Probability 0,59
Seq2Symm
C1 confidence 0,898
C1 0,898
C3 0,306
C2 0,012
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAIQSFLNFLDESKQLDEAFNSAPYELTFGKKNAGDIFFTFVDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGTTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMKGVTWDDPDKVGDVPVQSNPSDVGATPSPNTDWNISVMAKSNGIFSSVVKVVGANDVTLSSNDLAIMVKDGAMAKIARTQSIAQVTVFNKEYVGRGEVDRKIMAASDRQGMGWELKSGGKIVAYVEFGIGATAPVDMKTLPKTGSMDDLRNQGYIARILGIVDTYAPQQVGMYAGEKLTRVGAGKYRTSGGLDIQVYFWGIVNSKLSVEVVSDLSGNEQLMLEGDVKNAAFEIVSAISRAADSQFKGEVECRVVPINGAPYPIQKVSRSQGYSYVDCISFTLKIADALLNRFTLGKAVKLDLIKEFPRTTFIVRYDWRSKDTLMVQSSDGKTIFGEINTNSSDNAVITANLKAPSNAKIFGETVHGFSVAWDFQFPAGSQLQAARFVTNVTYDFDRNKANITTMLTENGRNVVNSSGYDIQLSVKSVQDALNETSQRLKDAAAQLSHLSSSNYNPNKLFLNDITVSKFGAIMFQDKDLAQSRNRTAVIDALARAKDQAAGGKNSSDLATYSDSIRNSAPNGRDLDWQVYVTNSGAVLNVDWSITFRRNTTEGAYREFKDQINRANQYLQTVYNDAKAKGYNPTEPNLMTLDSARQSDEWAMSNGDSAYSEYEQSLGGNLQIRLK
Physico‐chemical
properties
protein length:799 AA
molecular weight: 88047,39220 Da
isoelectric point:8,74709
aromaticity:0,09262
hydropathy:-0,34693

Domains

View on InterPro
Domain architecture
YP_004327465.1
1 799 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_004327465.1
1 799 aa
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,7831
Central domain 506 762 258 0,7378
C-terminal 763 799 36 0,7792
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage Vi01 [NCBI] · taxon 2991283
Uroviricota Caudoviricetes Pantevenvirales Ackermannviridae Kuttervirus Kuttervirus ViI
Host
Salmonella enterica subsp. enterica serovar Typhi [NCBI] · taxon 90370
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica

Coding sequence (CDS)

Genbank protein accession
YP_004327465.1 [NCBI]
Genbank nucleotide accession
NC_015296 [NCBI]
CDS location
range 61147 -> 63546
strand -
CDS
ATGGCCATCCAATCTTTCTTAAATTTCCTTGACGAGTCCAAACAATTGGACGAAGCGTTTAACTCCGCTCCATACGAATTGACTTTCGGCAAGAAAAATGCTGGTGACATTTTCTTCACGTTCGTAGACGAAGATGAAAAGGAATTCCGCATCCAATTTTATACCCCGCAGGGGCTGGGCAAGAACGTTCGTCAGGTCTTCATAGGCCAGAAACGTGGTTCAACCTATCCAGACGCAATCGGTCGTTTCAAAAACCCAATGCGTGTCATCGCATCCATGATCGAAGCGACTAAACAATTCATGGCGACACCGCTGGGTAAAACCATTGATGGGTTTGCGATTAACTTCTCCAAGAAAGCTCTAGAACGCGGAACGACGTTACTCCCAAAAATTATTCGTCAATCTGGTCTGAAGCAGAAACTCAACGTCATGGATCTGACTTATACCCCAATCCCTGACCGTGCCTTCGTATGGGTTGTGCGTAAAGGAAAGGATCCTGCTCAGGTATTTGATGGTCCGAAAATGAAAGGCGTGACTTGGGACGATCCAGACAAAGTCGGAGACGTTCCGGTTCAGAGCAATCCTTCTGATGTAGGAGCAACGCCTTCCCCAAACACAGATTGGAATATCTCCGTCATGGCGAAGTCCAACGGCATCTTCAGTTCTGTTGTGAAGGTAGTCGGTGCGAACGATGTGACTCTAAGTTCCAATGATCTGGCCATCATGGTCAAAGATGGCGCGATGGCGAAGATTGCCCGCACTCAGTCGATCGCTCAGGTGACCGTATTCAACAAAGAATATGTCGGTCGTGGTGAAGTGGATCGCAAAATCATGGCAGCTTCTGACCGTCAGGGAATGGGATGGGAACTGAAGTCCGGCGGCAAGATTGTGGCATATGTTGAATTTGGAATAGGGGCTACTGCCCCCGTCGACATGAAAACTCTTCCAAAAACCGGTTCTATGGATGATCTGCGCAACCAGGGTTATATCGCCCGCATCTTGGGCATCGTCGATACATATGCTCCTCAGCAAGTCGGCATGTATGCTGGTGAAAAATTGACTCGGGTTGGTGCTGGCAAATATCGAACTTCTGGCGGGTTGGATATTCAAGTCTATTTTTGGGGGATTGTCAACAGCAAACTCTCTGTAGAAGTGGTTTCTGATTTATCTGGCAATGAACAACTGATGCTGGAAGGCGACGTGAAAAACGCTGCTTTTGAAATCGTCAGTGCGATATCCCGTGCTGCTGATTCTCAGTTCAAAGGTGAAGTGGAATGTCGTGTTGTTCCGATCAACGGTGCCCCATACCCGATTCAAAAGGTTTCCCGTTCCCAGGGTTATTCTTATGTCGATTGTATTTCGTTTACCTTGAAGATCGCCGATGCATTGTTAAATCGTTTTACTCTGGGTAAGGCAGTCAAACTCGATCTGATAAAAGAGTTCCCTCGAACGACGTTTATTGTTCGTTATGACTGGCGCAGCAAAGATACTCTGATGGTCCAGTCTTCTGATGGGAAGACTATCTTCGGCGAAATCAACACAAATTCCAGTGATAACGCTGTCATCACTGCGAACCTGAAAGCCCCAAGCAATGCGAAGATATTTGGTGAAACCGTTCATGGGTTCTCTGTGGCTTGGGACTTCCAGTTCCCTGCGGGTAGCCAGCTGCAAGCCGCACGGTTCGTTACGAACGTGACTTACGACTTCGATCGTAATAAGGCCAACATCACGACCATGCTGACCGAAAATGGCCGAAATGTAGTCAATAGCAGCGGATATGACATTCAGTTATCTGTCAAGTCTGTGCAAGATGCGTTGAATGAGACTTCACAACGCCTGAAAGACGCTGCGGCTCAATTGAGCCATCTCAGTTCATCAAACTATAACCCGAACAAGCTGTTCCTGAATGATATCACCGTCAGTAAGTTTGGTGCAATTATGTTCCAAGACAAAGATCTGGCGCAGTCCAGAAACCGCACTGCAGTCATTGATGCCCTGGCTCGCGCCAAAGACCAAGCTGCTGGGGGCAAGAACAGCAGCGATCTGGCCACATATTCCGATTCCATCCGCAACAGTGCTCCCAACGGACGAGATCTTGATTGGCAAGTATACGTGACCAATAGCGGCGCAGTTCTTAACGTCGATTGGAGTATCACCTTCCGTCGCAACACAACCGAAGGTGCATATCGTGAGTTCAAAGATCAGATTAACCGTGCCAACCAGTACCTGCAAACGGTATACAACGATGCGAAGGCGAAGGGATACAACCCGACCGAACCGAATCTCATGACTTTGGATAGCGCCCGTCAGTCGGACGAATGGGCTATGAGCAATGGTGACAGTGCTTACAGTGAATATGAACAATCACTGGGTGGTAATCTCCAGATCCGTCTGAAATAA

Genome Context

Tertiary structure

YP_004327465.1
ESMFold2 structure
Source ESMFold2
pLDDT 45.5
Oligomeric state monomer
Download structure