Protein

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Genbank accession
CEK40236.1 [GenBank]
Protein name
Tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MSWAEVYKINSDIQGEPLNYLNYLQDLKLNGSESYLLYEGNHRIWEELYLNSLYLFSDRGIREVVYTAFSETDIDNLFDKSTKLGEQLNAFYRTDIFSLGNADNVVKGMTVEHYNSLEEKFKAGYDRYVTREQEKSTIGAWFNSTFSLNSTDLESLTTIDEILADTEATNAILNNSNAIVALTMCKTSMDAVVASSNAMDLLGQYILKVTAEPAVIKAILENNVIREAIINSIEAMTHISTNHESVRMIFENLEATQLLLANQDTLDLVLANTNVIRLVLTKILETHNSIFKLDINTLITNMTSMVNSTNIEYQDKIFPIVENMNTNFISIKDLLSNNNLDKNNIIAIFQCIENNLSVITALSSDELAFNSIKEIDLAIAKTAAKLAGIDNININTSDALARSDKYMNAVASSQIAMNAVASSQIAMNAVASSQIAMNAVASSQIAMNAVASSQIAMNAVASSQIAMNAVASSQIAMNAVASSQIAVNTIINNSGFLNIVISSSTAMSAIASSSTAMSAIASSSTAMSAIASSSTAMSAIASSSTAMSAIASSSTAILAISKSRVNLQAFNKAIWDNRLDSKLETTLLNSSSFTRTFNYQSDSWIKSNTGTNVGAYSQGDVITKPNKIFILKYTTNSDNGTITINADGFIQTGTDGNGSGSPGTFPGIVSHYDSELTCYRRVYFGKVNVQISTTGDYYYGDIFTAK
Physico‐chemical
properties
protein length:706 AA
molecular weight: 76486,16660 Da
isoelectric point:4,72312
aromaticity:0,07365
hydropathy:0,03017

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD24-1
[NCBI] 		1582149 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40236.1 [NCBI]
Genbank nucleotide accession
LN681534.1 [NCBI]
CDS location
range 23634 -> 25754
strand +
CDS
GTGAGTTGGGCAGAGGTTTATAAAATAAATAGTGATATTCAAGGAGAACCTTTAAATTATTTAAATTATTTACAAGATTTGAAGTTAAATGGTTCTGAAAGTTATCTTTTATATGAAGGTAATCATAGGATTTGGGAAGAGCTGTACTTAAATAGTTTATACTTATTTTCTGATAGAGGAATTAGAGAAGTTGTGTATACAGCTTTTTCAGAAACAGACATTGACAATCTGTTTGATAAAAGTACTAAGCTGGGGGAACAATTAAATGCCTTTTACAGAACAGATATATTTAGTTTGGGGAATGCTGATAATGTAGTAAAAGGAATGACTGTAGAGCATTATAATTCATTAGAGGAAAAATTTAAAGCAGGGTATGATAGATATGTTACAAGAGAACAAGAAAAGTCAACTATAGGAGCATGGTTTAATTCTACTTTTAGTTTAAATAGTACTGATTTAGAAAGTCTTACAACTATAGATGAAATATTAGCAGATACAGAAGCTACTAATGCGATACTTAATAATAGTAATGCAATAGTAGCTTTAACTATGTGTAAAACAAGTATGGATGCAGTTGTAGCAAGTTCAAACGCAATGGATTTGCTAGGACAATATATTTTAAAAGTTACAGCAGAACCAGCTGTTATAAAAGCGATTTTAGAAAATAATGTAATTAGAGAAGCTATAATAAATAGTATTGAAGCAATGACTCATATATCAACAAATCATGAATCAGTTAGAATGATATTTGAGAATTTAGAAGCTACACAGCTACTATTAGCTAATCAAGATACATTAGATTTAGTTTTAGCAAATACAAATGTTATTAGACTTGTACTTACAAAGATTTTAGAAACTCATAATAGTATATTTAAGTTAGATATAAATACTTTGATAACAAATATGACTAGTATGGTTAATTCAACTAATATAGAATATCAAGATAAGATTTTTCCTATAGTTGAAAATATGAATACTAATTTTATAAGTATAAAAGATTTATTATCAAATAATAACTTAGACAAAAATAATATAATTGCTATATTTCAATGCATAGAAAATAATTTAAGTGTTATAACAGCTTTATCAAGTGACGAATTAGCTTTCAATTCTATCAAGGAAATTGATTTAGCTATAGCAAAAACCGCAGCGAAGCTAGCGGGGATAGATAATATAAATATCAACACTTCGGATGCGTTAGCTAGAAGTGATAAATACATGAATGCTGTGGCAAGCTCACAAATAGCAATGAATGCTGTGGCAAGCTCACAAATAGCAATGAATGCTGTGGCAAGCTCACAAATAGCAATGAATGCTGTGGCAAGCTCACAAATAGCAATGAATGCTGTGGCAAGCTCACAAATAGCAATGAATGCTGTGGCAAGCTCACAAATAGCAATGAATGCTGTGGCAAGCTCACAAATAGCAATGAATGCTGTGGCAAGCTCACAAATAGCAGTAAACACAATAATAAATAATTCGGGATTCTTAAATATAGTAATCTCTAGCTCGACAGCCATGTCTGCCATCGCAAGTAGCTCGACAGCCATGTCTGCCATCGCAAGTAGCTCGACAGCCATGTCTGCCATCGCAAGTAGCTCGACAGCCATGTCTGCCATCGCAAGTAGCTCGACAGCCATGTCTGCCATCGCAAGTAGCTCGACAGCCATTTTGGCTATTTCTAAAAGCAGGGTTAATTTACAAGCTTTCAATAAAGCTATTTGGGATAATAGACTTGATTCAAAACTGGAAACTACATTATTAAATTCTAGTAGTTTTACACGAACATTTAATTATCAATCGGATTCTTGGATAAAATCTAATACTGGTACAAATGTAGGAGCATACTCTCAAGGAGATGTTATTACAAAGCCAAATAAAATATTTATATTAAAATATACTACTAATAGTGATAATGGAACAATTACTATTAATGCAGATGGATTCATTCAGACTGGTACAGATGGTAATGGTTCTGGTTCACCAGGAACATTCCCGGGTATTGTAAGTCATTATGATTCTGAGTTAACTTGTTATCGTAGAGTATATTTTGGTAAAGTGAATGTTCAAATAAGTACTACTGGTGATTACTACTATGGAGATATATTTACAGCTAAATAA

Tertiary structure

PDB ID
430cd74f6f6bd0c0dde6c7e61467db02bc1a8b9d5802fe47ddb4d63d26b77f85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6096
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank