Protein

View in Explore
UniProt accession
A0A8S5MEF6 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,76
Seq2Symm
C3 confidence 0,873
C3 0,873
C1 0,194
C2 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MKKIKRDVSLTTKIRNNMNRIQDEFYSHDTNSAVIELTMDRTDLKKIVVLFHFQRSNRFLEVIGNVKGNVVEVPFDTSLITVDETVTGYVYIEKVVQSADVYKFSFGVRVSEIDKHKELPVIEKDSKRIVAITEIVTKSELQEALSNIHVEGARYDDSEILKRLQALESTPKVDTSVFATKSELQNISLTPGPKGDKGETGDRGPIGPKGDAGERGPQGDTGPKGADGLQGPVGPIGPQGLQGIQGERGQDGQRGERGEQGPIGQTGPQGPIGLTGPKGADGVGIPQTLSLSGNTLTLSHGGGTVTLPASGQNAATSSSELTGEGMPNGKVDGTIGQTYVDTRKTNGALKWIKRTPSGNQGWAVLDGDTGWKTLNTLSKLGNSSVRIRRINDTVYYQFGGLQWGWFGIVRRSNPAFVAHPGNREKKCFLLSNGAIPYGYRTANSLIGPIYNDDGIPYGTWYVGGQGDANHLRFQFTDPVPTDRDIGDIRVSNISYVTEDPWPLT
Physico‐chemical
properties
protein length:504 AA
molecular weight: 54510,35810 Da
isoelectric point:6,69185
aromaticity:0,06944
hydropathy:-0,51786

Domains

View on InterPro
Domain architecture
A0A8S5MEF6
1 504 aa
STR 228–282 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Siphoviridae sp. ctet217 [NCBI] · taxon 2826409
Uroviricota Caudoviricetes Siphoviridae sp. ctet217
Host No host information

Coding sequence (CDS)

Genbank protein accession
DAD80713.1 [NCBI]
Genbank nucleotide accession
BK014887 [NCBI]
CDS location
range 1855 -> 3369
strand -
CDS
ATGAAAAAAATCAAAAGGGATGTCAGTCTGACTACTAAGATTCGAAATAACATGAATCGCATCCAGGACGAATTCTATTCTCACGATACTAATAGTGCAGTAATTGAATTAACAATGGACAGAACTGACTTAAAGAAAATAGTTGTGTTATTTCATTTCCAACGTTCCAATAGATTCCTGGAAGTAATTGGAAACGTCAAAGGCAATGTAGTAGAAGTGCCGTTTGATACTAGCTTAATTACTGTTGATGAGACAGTAACTGGATATGTATACATCGAAAAAGTGGTACAATCTGCTGATGTTTACAAATTTTCATTTGGTGTTCGTGTATCTGAAATTGATAAACATAAAGAATTGCCAGTAATTGAGAAGGATAGCAAACGAATCGTTGCAATCACTGAAATTGTAACCAAATCGGAATTACAAGAAGCATTGAGCAATATTCATGTTGAAGGTGCAAGATATGACGATTCAGAAATCTTGAAACGTCTCCAAGCACTTGAATCTACTCCTAAAGTAGACACAAGCGTATTTGCTACAAAATCTGAGCTACAAAACATCTCGTTAACTCCAGGACCTAAAGGTGACAAAGGGGAAACTGGCGATCGTGGACCTATCGGACCTAAAGGAGATGCTGGGGAACGAGGTCCTCAAGGGGATACTGGACCTAAAGGAGCAGACGGACTGCAAGGACCTGTCGGACCTATCGGGCCTCAAGGCTTGCAAGGCATCCAAGGCGAGCGTGGGCAAGACGGACAAAGAGGTGAACGTGGGGAACAAGGGCCAATCGGACAGACTGGACCTCAAGGACCTATTGGGTTAACAGGTCCAAAAGGTGCGGACGGAGTCGGAATTCCGCAAACTCTATCTCTTAGCGGGAACACACTAACGCTGTCTCACGGTGGCGGAACAGTTACTTTACCAGCTTCTGGTCAAAATGCAGCTACATCATCTAGTGAACTCACTGGTGAAGGTATGCCAAACGGTAAAGTCGATGGTACTATCGGACAGACATACGTCGACACACGTAAAACAAACGGCGCTCTGAAATGGATTAAGCGTACACCGTCAGGAAACCAAGGATGGGCTGTATTAGACGGTGATACCGGTTGGAAAACCCTAAACACACTTTCTAAATTAGGCAATTCTTCCGTACGTATCCGCAGAATTAACGATACCGTATATTACCAATTTGGTGGACTGCAATGGGGTTGGTTTGGAATTGTCAGACGTAGTAATCCAGCATTTGTTGCACACCCAGGAAACCGTGAAAAGAAATGTTTCCTTTTATCAAACGGCGCTATACCTTATGGATATAGAACCGCAAACTCACTAATTGGTCCAATATACAACGACGATGGTATACCGTATGGAACGTGGTATGTTGGAGGTCAGGGTGATGCCAATCACTTACGATTCCAATTCACTGACCCCGTACCAACCGATAGAGATATCGGAGACATCAGGGTTTCCAACATATCTTATGTTACAGAAGACCCTTGGCCATTAACATAG

Genome Context

Tertiary structure

A0A8S5MEF6
ColabFold structure
Source ColabFold
pLDDT 75.9
Oligomeric state monomer
Download structure