Protein

View in Explore
Genbank accession
XWX34059.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,49
Seq2Symm
C3 confidence 0,739
C3 0,739
C1 0,143
C5 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDKPDIESIDVVLQVLPLESSNRVVQHLYTLSTNNSQIKTIYRYVSGNSSSEWQFIQGLPSNKNSVISGSNLEDLTSPGVYFVTGMTDGMPDGVSSGFLELNIDANDNRIAKVTDIETGKEYTKVKKPTGVYAEWKKELEPTDMQKYLLSSIKDDGSVTFPLMVYTSSNKTFQQAVLDHVDSTGQTTFTFYVQGGVPGSPMPNSCRGIFISDTSNIASFHGVYTAVGTDGRDVTGSVVGGNWTTPKASPSYKELWTGAQSFSSIGTSKKLEDDISNYSYVEVYTKHKTVEKTKGNDDTGTICHKFYLDGSKTYVCSGTFVSGEKTDKTVPVTEFYRVGINFSGTTWKVVDSAVQNNKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50609,99080 Da
isoelectric point:5,44310
aromaticity:0,09825
hydropathy:-0,40873

Domains

View on InterPro
Domain architecture
XWX34059.1
1 458 aa
RBD 337–458
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XWX34059.1
1 458 aa
Domain Start End Length (AA) Confidence
N-terminal 1 322 322 0,5856
Central domain 323 447 126 0,0254
C-terminal 448 458 10 0,9939
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Staphylococcus phage PG-2021_47 [NCBI] · taxon 2815631
Uroviricota Caudoviricetes Herelleviridae Staphylococcus phage PG-2021_47
Host
Staphylococcus xylosus [NCBI] · taxon 1288
Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus Staphylococcus xylosus

Coding sequence (CDS)

Genbank protein accession
XWX34059.1 [NCBI]
Genbank nucleotide accession
MZ417337.1 [NCBI]
CDS location
range 40905 -> 42281
strand +
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACAGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCTTATGGAAACATAACAGCTCTTAGAGATATAAAAGAACCCGGTTACTATTATATTGGAGCTAGAACATTAGCAACGTTATTAGATAAACCTGATATAGAATCTATTGATGTAGTACTTCAGGTACTACCTTTAGAATCTTCTAACCGAGTAGTACAACACTTATATACTTTGTCTACTAATAATAGTCAAATTAAGACTATATATAGATATGTTTCAGGAAATTCAAGTTCAGAGTGGCAGTTTATTCAAGGACTACCAAGTAATAAAAATTCTGTTATATCAGGTTCTAACTTAGAAGATTTAACTTCCCCTGGGGTATACTTTGTAACAGGTATGACAGACGGTATGCCTGATGGAGTTAGCTCAGGGTTCTTAGAATTAAATATAGATGCTAATGATAATAGAATAGCTAAGGTAACTGATATTGAAACAGGAAAAGAGTATACTAAAGTTAAGAAACCTACAGGGGTATACGCAGAATGGAAAAAAGAGCTAGAACCTACGGATATGCAAAAGTATTTATTAAGTAGTATAAAAGATGATGGCAGTGTTACATTTCCATTAATGGTTTACACTTCAAGTAATAAAACATTCCAACAAGCTGTTTTAGACCATGTTGATAGTACAGGGCAAACTACTTTTACATTCTATGTTCAAGGAGGGGTTCCAGGTTCACCTATGCCTAACAGTTGCAGAGGTATTTTTATTTCAGATACATCAAATATTGCTAGTTTTCATGGTGTATACACTGCAGTAGGTACTGATGGTAGGGATGTTACAGGTTCAGTAGTAGGGGGTAATTGGACTACCCCTAAAGCTTCTCCTTCCTATAAAGAATTATGGACTGGGGCACAATCATTTTCCTCTATTGGAACTTCCAAGAAGTTAGAAGACGATATAAGTAATTACTCATATGTAGAGGTTTATACTAAACATAAAACTGTAGAGAAAACTAAGGGAAATGATGACACAGGAACTATTTGCCATAAGTTTTATTTAGATGGCAGTAAAACTTATGTTTGTTCAGGAACTTTTGTTTCAGGAGAAAAAACAGACAAAACAGTACCTGTTACAGAATTTTATAGAGTAGGTATTAATTTTTCAGGAACAACTTGGAAAGTAGTAGATAGTGCAGTACAAAATAATAAAACTCAATACGTCACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Tertiary structure

XWX34059.1
ColabFold structure
Source ColabFold
pLDDT 80.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank