Protein

View in Explore
Genbank accession
UOK17491.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 0,53
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,98
Seq2Symm
C3 confidence 0,980
C3 0,980
C1 0,017
I 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAKIFNRPFATTGDREDLPVSDQPDGKASWDAGWTPDYELPSDNPNSRPVGRQEMNGVLHGVTEALGELQLFGFAKWQAVVGGWPLGAMAYHGGAVYKSTDGANTTQPGSPGAKWELAFWHSAALTGNPTAPTQAPGNVSTRIATTEFVAQELTRAIKDIPGVVRRVYTSNATWKKPAGLKSALVQVQGGGGGGGGTISTTATNRAVIGAGGGAGGYVEALISADALPAEVLVTHGASGGGGAVSGSGAAGGASSFGAILTASGGGGGGAGQVQQAAVTRGLAAGGVAGATSASAIGALSYGGESGGIGFSFAAAGAGISGNGGSSHLGVGGPSVAEGSPGLNASGYGAGGSGGCSGSPSGSDSGRPGGSGSPGVVIVTEYY
Physico‐chemical
properties
protein length:382 AA
molecular weight: 36693,80150 Da
isoelectric point:5,73593
aromaticity:0,06545
hydropathy:-0,05654

Domains

View on InterPro
Domain architecture
UOK17491.1
1 382 aa
STR 170–379 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Bordetella phage vB_BaM-IFTN8 [NCBI] · taxon 2928724
Uroviricota Caudoviricetes Bordetella phage vB_BaM-IFTN8
Host
Bordetella avium [NCBI] · taxon 521
Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella avium

Coding sequence (CDS)

Genbank protein accession
UOK17491.1 [NCBI]
Genbank nucleotide accession
OM293957.1 [NCBI]
CDS location
range 18790 -> 19938
strand +
CDS
ATGGCAAAGATTTTCAACCGACCTTTTGCGACGACCGGCGACCGCGAAGATTTGCCTGTATCGGATCAGCCGGACGGCAAGGCATCGTGGGACGCTGGCTGGACCCCGGATTACGAGCTCCCGAGCGACAACCCCAATTCCCGCCCCGTTGGACGGCAGGAAATGAACGGGGTGCTCCACGGTGTCACGGAAGCGCTTGGTGAGTTGCAGTTGTTCGGGTTTGCTAAGTGGCAGGCGGTTGTGGGCGGCTGGCCGCTGGGCGCAATGGCGTACCACGGCGGCGCAGTCTACAAATCCACTGATGGGGCGAACACCACTCAGCCCGGCTCCCCTGGTGCTAAGTGGGAACTTGCTTTCTGGCATTCGGCCGCCCTTACCGGAAACCCCACGGCGCCGACACAGGCGCCGGGCAACGTCAGCACTCGCATCGCCACTACCGAGTTTGTAGCGCAAGAGCTGACCCGAGCCATTAAAGACATTCCGGGCGTCGTGCGCCGCGTTTATACGTCGAATGCGACGTGGAAGAAACCGGCAGGCCTCAAGTCCGCTCTTGTACAGGTGCAGGGCGGTGGCGGCGGTGGCGGCGGAACGATCAGTACAACGGCTACCAATCGGGCAGTGATTGGAGCGGGCGGAGGCGCTGGGGGGTATGTCGAGGCGCTCATCAGCGCTGACGCGCTGCCCGCGGAGGTTCTTGTTACTCACGGCGCTTCGGGCGGTGGCGGCGCCGTATCTGGCTCGGGCGCAGCGGGAGGCGCGTCCAGCTTTGGGGCAATCCTAACCGCGAGCGGCGGCGGTGGCGGAGGTGCGGGGCAGGTGCAACAGGCCGCTGTAACTCGCGGACTCGCTGCGGGCGGGGTGGCAGGTGCCACGAGCGCGTCCGCGATCGGCGCCCTTTCTTATGGCGGGGAAAGTGGTGGCATTGGCTTCTCCTTCGCGGCCGCAGGCGCCGGAATTTCTGGCAACGGAGGGTCGTCGCATCTAGGGGTTGGAGGCCCGTCGGTTGCCGAGGGCAGCCCTGGCTTGAACGCATCTGGCTATGGTGCGGGCGGGTCTGGGGGGTGCTCTGGATCGCCGTCCGGCAGTGATAGCGGTCGTCCTGGTGGCAGCGGGTCTCCGGGCGTCGTGATCGTCACGGAGTACTACTGA

Genome Context

Tertiary structure

UOK17491.1
ESMFold structure
Source ESMFold
pLDDT 88.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and characterization of Bordetella avium bacteriophages Serian,D., Churin,Y., Kehrenberg,C. and Hammerl,J.A. 2023-06-15 — GenBank