Phage RBP Database

Genbank accession

ANT41225.1 [GenBank]

Protein name

tail spike protein

RBP type

TSP

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,97

Seq2Symm

C3 confidence 1,000

C3	1,000
C1	0,060
D3	0,022

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSNVRKVGLLPTSPYRRYLPSAFDESMNIYEQLITCIEHVNNLGISFNELVDWLDKVVLQQNERLDEQDKKIDMLRDEWHIFEDYVINTLLKKKVVEVLKEWLEDGTLAEIINNDVMNMKVDKVGTVYVKDFKKLEDETDDTGRVKRAFEELKKDENSTLVFEPIKYVVSEGFDVPSNKVIRGYKGKTVIDGKNIETATTLYQKGLFHVKGTLAEPIGLAQSVAQGDSKIVAPACDALLIGDLLIITSDESYAEGAPPSSRRGEIVTVKSFDGSNIELQGEVYFSYDQTKNARVQCMRGMKDVTIKDLDIIMGGKGKGHNGVIVENAQRVVVKNVFIDGAEDCGVVMTTCYNSHVYKSDIINNTSPGGTIGTSGYGVAFLSSKECSARDNFFRNSRHAIAGGGFIPAFACDITGNKVVDCPQYAYDCHEPCFFWNFSNNSATSCVGGFTIRGQFTRVVGNTITSSFANGILVESYTPVDNQKGNLIADNTIQYSKLNGIFCDGKNAIQTDLTITNNKIFNVKFAGINVFNTMNAIIEGNSVKNDYENGIRVLGRATGYRSNKLVIKGNTVYKSRFSNIRVAGVDNVIISGNNVETNTKDGIELFGAKEFIVDGNLVKDCEFYGIRSEESTNGSYTNNYLKTVRGENSDGLRIIKGGKIVMNGNTIVNPKRFGIYTTDTLYTIITSNNVYDCPSDGVKIDGPIKTHINQNNLTKAIDA

Physico‐chemical properties

protein length:	717 AA
molecular weight:	79241,68280 Da
isoelectric point:	5,64840
aromaticity:	0,08647
hydropathy:	-0,27866

Domain architecture

ANT41225.1

1 717 aa

STR 134–716 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil IPR012334 IPR012334 IPR012334

IPR011050
STR

IPR011050 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

IPR006626
Unmapped

IPR006626 IPR006626 IPR051550

IPR006626
Unmapped

IPR006626 IPR006626 IPR006626 IPR039448

IPR011050
STR

IPR011050

ANT41225.1

1717 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0396
ATT

DC_0396

ANT41225.1

1717 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	58	78	Coils	Coil	-	-	-	-
IPR012334	STR	IPR012334	134	404	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	158	520	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	300	326	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	350	381	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	405	555	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR051550	Unmapped	-	446	711	InterPro	SCF Complex Subunits and Alginate Epimerases	-	-	-	-
IPR006626	Unmapped	-	452	474	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	481	503	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	508	530	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	510	711	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	531	553	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	536	686	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR012334	STR	IPR012334	556	716	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	560	582	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	583	605	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	606	628	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	629	654	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	655	677	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	678	700	InterPro	Parallel beta-helix repeat	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

ANT41225.1

1 717 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	142	142	0,9874
Central domain	143	706	565	0,9939
C-terminal	707	717	10	0,1606

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage Stitch [NCBI] · taxon 1874002

Uroviricota Caudoviricetes Salasmaviridae Claudivirus Claudivirus stitch

Host No host information

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)