Protein

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Genbank accession
XOD32452.1 [GenBank]
Protein name
baseplate wedge protein
RBP type
TF
Evidence RBPdetect2
Probability 0,59
Seq2Symm
C1 confidence 0,991
C1 0,991
C3 0,055
I 0,006
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MDGVSQWRSSYTRRQIKVLDSKLTSKTSLEGSIYVTDLSAMKSIPFSAFGLIPGEPINPNSLEVRFNGILQQQAGTAGYPLFLCEGANSDTQEGCISLGGEWKESNTDYSIEYEDGKPISLLFDRKFESGDIIVITWFNNDLGTLLEKDDIIELTDDRYVSKGSSTEVTGDVALTDFDKIGWPNVEKVDSYTRTYNSISSIFDSIYPVGSIYENAINPNNPVTYMGFGSWKLFGKGQVLVGWNDDVTDPNFALNNNDLDSSGNPSHTAGGTVGTTSVTLENANLPATKTDERVLIEDENGSVIIGGCQYDPDETGPIYTKYREDYATTNSSHTPPANINNIQPSITVYRWIRIA
Physico‐chemical
properties
protein length:354 AA
molecular weight: 38942,48530 Da
isoelectric point:4,35525
aromaticity:0,09887
hydropathy:-0,41808

Taxonomy

Phage
Shigella phage sb4 [NCBI] · taxon 3387549
Shigella phage sb4
Host
Shigella flexneri [NCBI] · taxon 623
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri

Coding sequence (CDS)

Genbank protein accession
XOD32452.1 [NCBI]
Genbank nucleotide accession
PQ666542 [NCBI]
CDS location
range 90079 -> 91143
strand +
CDS
ATGGATGGTGTGTCACAATGGAGAAGTTCATATACAAGACGCCAAATAAAAGTACTGGATTCAAAACTAACATCAAAGACTTCTTTAGAAGGAAGCATTTATGTTACTGATTTATCGGCGATGAAATCAATTCCATTTTCTGCATTTGGATTAATTCCTGGTGAACCAATTAATCCGAACTCTCTTGAGGTTCGTTTTAATGGAATTTTGCAGCAGCAGGCTGGAACAGCTGGATATCCTCTGTTTTTGTGTGAAGGCGCTAATTCAGATACGCAAGAAGGATGTATATCTCTTGGTGGCGAATGGAAAGAATCAAACACCGATTATTCTATAGAATATGAAGACGGAAAACCTATCAGTCTTTTATTTGATAGAAAATTTGAATCCGGTGACATTATCGTTATAACATGGTTCAATAATGATTTAGGAACTCTTTTAGAAAAAGATGACATCATTGAATTGACTGATGACCGTTATGTTAGTAAAGGATCATCTACTGAAGTTACTGGTGATGTGGCCTTAACAGATTTTGATAAAATCGGTTGGCCAAATGTTGAAAAAGTTGATTCTTATACTAGAACGTATAATTCAATATCATCTATTTTCGACAGCATTTATCCTGTTGGTTCAATTTATGAAAATGCTATAAACCCAAATAATCCGGTGACTTATATGGGATTTGGTTCATGGAAATTATTTGGTAAAGGACAAGTTTTAGTAGGATGGAATGATGATGTTACAGATCCAAACTTTGCTTTAAACAATAATGATTTAGATTCTAGCGGAAATCCTTCACATACGGCAGGTGGAACGGTTGGAACAACATCAGTAACGCTTGAAAACGCAAATCTTCCTGCAACTAAAACCGACGAAAGAGTTTTAATTGAAGACGAAAATGGATCGGTTATTATTGGAGGTTGCCAATATGACCCAGATGAAACTGGTCCTATATATACAAAATATCGTGAAGATTACGCAACAACAAACTCTTCACATACTCCTCCTGCTAATATTAATAATATTCAACCGTCTATTACTGTATACCGTTGGATAAGGATTGCATAA

Genome Context

Tertiary structure

XOD32452.1
ESMFold2 structure
Source ESMFold2
pLDDT 64.3
Oligomeric state monomer
Download structure