Protein

View in Explore
Genbank accession
QBI80481.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTYATGNPLGSKDPRDLYDNAENFDAAMNDRVNTTWNDRFGVSRPTMKGYEEQFNDWLDAQGFEPGFLVYVDGSPLTVDRPTQLIQRGDNIYSVKRPASFPVELTGNWAADEPLLVAQVDRTLQDTLATSAGAGMIGYRERTVADRLNDTANVKDYGAIADGAYHPLSERFATLAEAQAVYPHATALTDSIDWAAYQAAINSGAPHVHAPGGHYVMNRGTLAERDIRYTGDGYATRVDFSLADGPGSCMLTQGELVQIGDLSVSVVKGARTLTFAAAPDLAPGDVVIVYNPTNGSWLADRDPYRAGEMWKVHSVSGSTVTIYGNSSSVYLFTEVDVYRMRGVRVSVDQMHFSPSDTYSIAPFKVVFGDGVKVSNYYASDVTLYTGLEVERCFDVSINAVSSPNRSPAVNDEYGITISNCHNFSVYGGYAAATRHAVALGGMDDVCCVPNRHGLIYGMNIEGIDLASDTSAGDMHGNADKITYDNCEFRNGVILQGRDATVRNSTVYGVSSASGEAIYGSEVYGGTYTIENNRFISYGDGASFGIVHISPSSTQREALLIIARNNTFELPNATGSTKVFFLRGRNSPLPISANIDGVHVHMASVAMQCFLFADDSIKSELLSNYLIIDNVYGPFGTSLLYPTTKNANIPTRQMEQSGEVTVTTNGTATALPASNVSFRYPYSKKPMAVACASGVNGVAFSSLGGQSPVPIVYAVVAASIRPGLVAATSSFTSGEQAVVGWRAGIKEI
Physico‐chemical
properties
protein length:747 AA
molecular weight: 80181,39380 Da
isoelectric point:4,99157
aromaticity:0,09639
hydropathy:-0,13869

Domains

Domains [InterPro]
IPR012334
114–513
IPR012334
IPR011050
186–537
IPR011050
IPR049350
252–340
IPR049350 IPR054136
QBI80481.1
1 747
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF124b
[NCBI] 		2563542 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI80481.1 [NCBI]
Genbank nucleotide accession
MK511008 [NCBI]
CDS location
range 15708 -> 17951
strand +
CDS
ATGACGACCTACGCCACCGGTAACCCGCTGGGCTCCAAAGACCCGCGTGATCTGTACGACAACGCCGAGAACTTCGACGCGGCGATGAACGACCGGGTGAATACCACGTGGAATGATCGTTTCGGCGTTAGTCGCCCAACGATGAAAGGGTATGAGGAACAGTTCAACGACTGGCTGGACGCCCAGGGCTTCGAGCCAGGTTTCCTCGTGTACGTCGACGGCTCCCCGCTGACCGTAGATCGCCCGACCCAACTGATCCAGCGCGGGGACAACATCTACAGCGTCAAGCGCCCGGCATCGTTCCCCGTTGAGCTGACCGGGAACTGGGCAGCCGACGAACCCCTGCTGGTGGCCCAGGTTGACCGGACGCTGCAAGACACCCTGGCCACCAGCGCTGGCGCCGGGATGATCGGCTATCGCGAGCGCACCGTCGCCGACCGCCTGAACGACACCGCCAATGTCAAGGACTACGGCGCTATCGCAGATGGGGCGTATCACCCGTTGTCAGAGCGGTTCGCTACGCTCGCCGAGGCGCAGGCGGTCTATCCGCACGCCACTGCGCTGACCGACAGTATCGATTGGGCGGCGTATCAGGCGGCAATCAACTCCGGGGCGCCGCATGTGCATGCGCCAGGCGGCCACTACGTCATGAATCGCGGAACTCTCGCTGAGCGGGATATTCGGTATACCGGCGATGGCTATGCTACCCGCGTGGATTTCAGCCTCGCAGATGGCCCAGGTAGCTGCATGCTGACGCAGGGTGAGCTTGTGCAAATCGGCGATCTGTCCGTGAGCGTGGTTAAGGGCGCTCGCACGCTGACATTTGCCGCTGCGCCAGACCTGGCTCCGGGCGACGTGGTCATCGTGTACAACCCCACCAACGGCTCTTGGCTGGCTGATCGCGATCCGTATCGTGCTGGCGAGATGTGGAAGGTCCATTCGGTAAGCGGCAGCACTGTCACGATCTACGGAAACAGCTCGTCGGTGTACCTGTTCACCGAGGTAGATGTATACCGCATGCGCGGCGTGCGCGTGTCTGTCGATCAGATGCACTTTTCGCCGTCTGACACATATTCCATTGCGCCGTTTAAGGTTGTGTTCGGAGATGGTGTGAAGGTTTCCAACTACTACGCTAGCGATGTCACGCTTTACACAGGGCTAGAAGTAGAACGATGCTTTGACGTTTCGATCAATGCGGTTTCAAGCCCGAACAGATCGCCGGCAGTCAATGACGAATATGGGATTACTATCTCGAACTGCCATAATTTCTCGGTGTACGGTGGTTATGCAGCGGCAACCAGGCATGCTGTCGCGCTTGGTGGAATGGATGATGTATGTTGCGTGCCCAACCGTCACGGACTGATATACGGGATGAACATTGAGGGGATCGACTTAGCGTCGGATACCAGCGCGGGAGACATGCACGGGAATGCCGACAAAATCACATACGACAACTGCGAGTTTCGGAATGGGGTAATTCTTCAAGGGCGCGACGCAACTGTTCGTAACAGCACTGTCTACGGAGTATCCAGCGCTTCCGGCGAAGCGATCTATGGATCGGAAGTATACGGTGGCACCTACACCATCGAGAATAATCGATTTATCAGCTATGGCGATGGCGCATCGTTTGGCATCGTCCATATATCGCCAAGCTCCACTCAGCGCGAAGCATTGCTGATCATCGCGCGAAACAATACATTCGAGTTGCCGAACGCCACGGGGTCGACGAAAGTGTTTTTCCTGCGTGGACGCAATAGCCCGCTTCCGATTAGCGCAAACATTGACGGAGTACACGTCCATATGGCATCTGTCGCGATGCAATGTTTCCTATTCGCGGACGACAGCATCAAGTCTGAACTTCTTTCTAACTACCTTATTATTGACAATGTTTACGGGCCATTCGGAACATCATTGCTTTACCCGACAACCAAGAATGCGAACATTCCTACGCGTCAGATGGAGCAGAGTGGGGAAGTAACAGTTACCACTAACGGAACTGCAACGGCTCTGCCGGCTTCCAACGTCAGTTTCCGATATCCATACTCTAAGAAGCCAATGGCGGTAGCCTGCGCATCAGGCGTCAACGGGGTAGCATTTTCTAGCCTTGGGGGGCAATCCCCGGTGCCAATTGTGTACGCCGTTGTCGCTGCTTCTATCCGGCCTGGACTGGTTGCTGCAACCTCTTCTTTCACCTCCGGAGAGCAGGCGGTCGTGGGGTGGAGGGCAGGAATCAAGGAGATATAG

Tertiary structure

PDB ID
251d6bfd7f35e13339f76879d0fd3e481ee4d46b5c9d3b7b77070f690c65902a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank