Phage RBP Database

Genbank accession

YP_010683231.1 [GenBank]

Protein name

tail fiber protein and host specificity

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,85

Seq2Symm

C1 confidence 0,998 truncated

C1	0,998
C2	0,003
C3	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MLLTIHDNNLQKVAYIDNEKQSTLNFFNDKWTRSLESGTSVFEFSVFKKSIKSKSNVDFAYKYLNERSFVSFKHKRRSYLFNVMKVEEDEHIIRCYCENLSLELLLEYRGAYKASKPMTFKEYFDDWGMERFAKLTIGVNEVSDQKRTLEWEGQETTLARLISLARNFDAEIEFETKLQANSQLDEFVLNVYKSHDDKNQGVGLRRSDIVLKYDKNIKSIKRSVDKTQIYNMITPYGRKTETNKETKRISDPVTIQNPVVVPSTRVEKRYTGGDLTYAGHTLSASLVQTIFNLCIQRNLLPSGVISQLYLESFWGSSNVARRDNNWSGMTGGAQTRPSGVIVTTGSPRPASEGGTYMHYASVDDFMKDYTYLLAEQTSGGRKMYGVKGKQNIEEYTKGLFRIGGALYDYAAAGYNHYIYLMRDIRNGINRSNGNILDKLDDLWRQPDNQITQPNQPVTRTVKADKVIAVLNEMQGLKGRRVGNGQCYALAAWYSMKLGGPGLGAGVTGKSGAIGSGMCASNIGTDYAWDKFGWSVVRPSSVNQLKAGAIANIKAYNSYIGTSVWGHVSIIIANNGSTVTVLEQNYAGRQYVVQNSYPASAYLGSIETLCYPPELKEGKTVEGRTETVSALNVEVQKVEIPPIDVEVTSESTDALTIDSKRKQEWKNDKGQVEFYLENGSLYAPISKELYPSILTGKENGDNWIRKDMEIDTDSEDVLISTALRNLRKFCYPAITYEVDGFIDLDIGDTVKIQDTGFSPILMLEARVSEQQISFTNPVENKTVFANYQALQNKVSDSLLSRMTKLAEQAIPYELKLSTDNGTTFKNSVGQSVLKASLEKNGVVYQPIFFYKNGDAIIGTGNQLVVKPTDFENTLQVTVEAYLDDELVASTEITFTDVSDGEQGPQGPQGIDGKTPYVHTAWSYSADGTDRFTTVYPNLNLIDGTRDFSGNWDRDWAWSNDGSYKGLTVKKRTDEWQGINKEFKAPKDGTYTFSAYIKTSGNTANIARHIHLNGSWNKDTYKTFRNNFDWLRDSFSVNLKTGDTISARYELPGEGILWTAGHKWEEGPVATPWMPSASEVTTADYPKYIGQYTNYMEVDSPNPQDYTWSLIRGNDGKQGPQGPKGESGPQGLQGPKGDQGIPGPKGEDGKTQYTHIAYADTISGSGFSQTDVNKPYIGMYQDFNAVDSQNPQDYRWSKWKGSDGRDGIPGKPGADGRTPYVHFAYADSADGQKGFSLTQTGAKRYLGVLTNFFKEDSTNPSDYTWNDTAGSISVGGRNLLVKTNQGITNWNWQLSDGDKSVEEVKVDGIRAVKLIKGSTTANTGWNFIEYNGLLRELIQPKSKYVLSFDVKPSVDVTFYATLTNGDFTETLTDTVAMHKALANQWNKVSCVLTSKETLPNIAWQTVYLAGMPTTNGNWVIIKNIKLEEGDIPTQWTPAIEDIQDEIDSKADSAMTTEQINALNERAAIIQAETEARASAEILNKWIKNYQDFVKANETERAAAEKALVSSSQRVSTIAKELGELSDRWNFIDTYMNTSNDGLVIGKNDGSSSIVFNPNGRISMYSAGSEVMYISQGVIHIENGIFSKTIQVGRYREEQYHLNPDMNVIRYVGGF

Physico‐chemical properties

protein length:	1612 AA
molecular weight:	179993,91830 Da
isoelectric point:	5,56234
aromaticity:	0,10360
hydropathy:	-0,53654

Domain architecture

YP_010683231.1

1 1612 aa

ENZ 136–244 · ENZ 274–402 · STR 403–610 · RBD 969–1062 · STR 1257–1427 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR010572
ENZ

IPR010572 IPR002901 IPR007921 PTHR24637 G3DSA:2.60.120.260

IPR002901
ENZ

IPR002901 G3DSA:3.90.1720.60 IPR008983

IPR007921
ENZ

IPR007921

YP_010683231.1

11612 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0558
ATT

DC_0558 DC_0255

YP_010683231.1

11612 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR010572	ENZ	DC_0675	136	244	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
IPR002901	ENZ	DC_0048	274	415	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
IPR002901	ENZ	DC_0048	293	403	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
G3DSA:3.90.1720.60	STR	G3DSA:3.90.1720.60	403	610	Merged direct domain	G3DSA:3.90.1720.60	Central	Low	Positional only	18 proteins / 18 hits
IPR007921	ENZ	DC_0404	461	612	InterPro cluster	CHAP domain	C-terminal	High	Text match	2 proteins / 2 hits
IPR007921	ENZ	DC_0404	482	584	InterPro cluster	CHAP domain	C-terminal	High	Text match	2 proteins / 2 hits
PTHR24637	Unmapped	-	898	1219	PANTHER	COLLAGEN	-	-	-	-
IPR008983	RBD	IPR008983	969	1062	Merged direct domain	Tumour necrosis factor-like domain superfamily	C-terminal	Low	Positional only	19 proteins / 19 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1257	1427	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits

Proteins with similar domain architecture

Phage

Streptococcus phage P7955 [NCBI] · taxon 1971440

Uroviricota Caudoviricetes Aliceevansviridae Brussowvirus Brussowvirus P7955

Host

Streptococcus thermophilus [NCBI] · taxon 1308

Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus thermophilus

Genbank protein accession

YP_010683231.1 [NCBI]

Genbank nucleotide accession

NC_071079.1 [NCBI]

CDS location

range 15239 -> 20077
strand +

CDS

ATGTTACTAACAATACATGACAATAATTTGCAGAAAGTTGCATATATAGATAACGAAAAACAATCCACGCTAAATTTTTTCAACGACAAATGGACTCGATCACTTGAAAGCGGAACATCTGTTTTTGAGTTTTCGGTTTTTAAGAAAAGCATTAAATCTAAATCGAATGTAGATTTTGCTTATAAATATCTTAACGAGAGATCTTTTGTCAGCTTCAAACACAAGAGACGCTCTTACCTTTTCAATGTTATGAAAGTTGAAGAGGATGAGCATATTATTCGATGCTACTGTGAAAACTTGAGCCTTGAATTACTTTTAGAGTATCGAGGTGCTTACAAAGCATCAAAACCTATGACATTCAAAGAGTATTTTGACGATTGGGGAATGGAACGATTCGCTAAATTGACTATTGGTGTCAACGAGGTTTCTGATCAAAAGAGGACTCTAGAGTGGGAAGGACAAGAAACAACTCTTGCTCGACTGATTTCGTTAGCTAGGAACTTTGATGCTGAAATAGAATTTGAGACAAAGCTACAAGCTAATAGTCAACTTGATGAGTTTGTTTTAAACGTTTACAAGTCTCATGATGATAAAAATCAAGGTGTTGGTCTCAGACGCTCAGATATTGTTCTGAAGTATGATAAGAACATAAAAAGCATTAAGCGTAGCGTTGACAAGACTCAGATTTATAACATGATAACACCTTATGGTAGAAAAACTGAGACGAATAAAGAAACCAAAAGAATCTCCGATCCAGTTACTATTCAAAATCCAGTTGTTGTTCCATCTACTAGAGTTGAAAAAAGGTATACTGGAGGTGACTTGACTTATGCAGGCCATACGTTGAGTGCTAGTTTGGTTCAAACCATCTTTAATCTTTGTATACAGCGAAATCTTTTGCCATCAGGCGTCATATCTCAGCTCTATCTTGAATCGTTCTGGGGGTCTTCTAATGTAGCTAGACGAGACAATAACTGGAGCGGCATGACTGGTGGTGCACAAACTCGCCCATCTGGTGTCATTGTAACAACGGGTAGTCCTAGACCAGCTAGCGAAGGTGGAACGTACATGCACTATGCTAGCGTTGACGACTTCATGAAAGACTACACTTATCTACTAGCAGAGCAGACGAGTGGTGGTCGTAAGATGTACGGTGTCAAAGGCAAGCAGAACATTGAAGAATACACAAAAGGGCTCTTCCGAATTGGAGGAGCTCTTTATGATTATGCTGCTGCTGGATACAACCACTATATCTATCTTATGCGAGATATTCGAAATGGTATCAACCGTTCAAATGGAAACATTTTGGATAAGTTAGATGATTTGTGGAGACAGCCAGACAATCAAATCACTCAACCAAACCAACCAGTAACGAGAACTGTTAAGGCAGATAAAGTTATCGCCGTCCTCAATGAAATGCAAGGGTTGAAAGGTCGTCGAGTAGGTAACGGTCAATGTTATGCATTAGCAGCTTGGTATTCTATGAAATTAGGTGGTCCAGGTCTCGGTGCTGGAGTTACTGGCAAGTCTGGTGCAATTGGTTCTGGTATGTGTGCATCCAATATTGGTACTGACTACGCTTGGGATAAGTTCGGTTGGAGTGTTGTTAGACCTAGCAGTGTTAACCAATTAAAAGCTGGGGCTATTGCTAATATCAAGGCATACAATAGTTATATAGGTACGTCTGTTTGGGGACACGTTTCAATTATCATCGCTAACAACGGTAGCACTGTTACGGTTCTAGAACAAAACTACGCTGGCCGTCAATACGTTGTCCAAAATAGCTATCCTGCTAGTGCTTATTTAGGATCTATTGAAACATTATGTTATCCTCCTGAATTGAAAGAGGGTAAAACGGTTGAGGGTAGGACTGAAACAGTTAGCGCTCTAAACGTTGAAGTTCAAAAGGTAGAGATTCCACCTATCGACGTTGAAGTAACATCTGAAAGCACAGATGCACTTACTATTGATAGCAAACGAAAGCAAGAATGGAAGAACGATAAAGGTCAAGTTGAGTTTTATCTTGAAAACGGTTCGCTATATGCTCCGATTTCAAAAGAACTATATCCATCCATTTTAACCGGTAAAGAGAATGGCGATAACTGGATACGGAAAGATATGGAAATAGACACGGACAGCGAAGACGTGCTTATTTCGACAGCTCTTAGAAACCTACGAAAATTCTGTTATCCAGCTATTACTTATGAGGTTGATGGTTTCATTGATTTAGATATTGGGGACACAGTTAAAATCCAAGACACTGGGTTCTCGCCTATTTTGATGCTTGAAGCTCGTGTCAGCGAACAACAGATTAGTTTCACTAATCCCGTCGAGAATAAGACGGTATTCGCTAACTACCAAGCACTTCAAAACAAAGTTTCAGACAGTTTATTATCCCGAATGACTAAATTGGCTGAGCAAGCTATTCCTTACGAGTTGAAACTTTCAACCGATAATGGGACTACATTTAAGAATAGTGTTGGTCAAAGCGTACTAAAAGCTTCGCTTGAAAAGAACGGTGTAGTTTATCAACCAATATTCTTCTATAAAAATGGCGATGCTATCATCGGTACTGGCAATCAGTTAGTTGTTAAACCAACAGATTTTGAAAATACTTTACAGGTAACTGTTGAAGCGTACCTTGACGACGAGTTAGTAGCAAGTACAGAAATCACATTCACAGATGTCTCAGATGGCGAACAAGGACCACAAGGTCCACAAGGTATAGACGGTAAAACGCCTTACGTTCACACGGCTTGGTCTTACAGTGCAGATGGTACAGATAGATTCACTACGGTTTATCCGAATTTGAACTTGATTGATGGTACAAGAGATTTCAGTGGTAATTGGGATAGAGATTGGGCTTGGTCAAATGATGGATCATACAAAGGATTAACCGTTAAAAAAAGAACTGATGAATGGCAGGGTATTAATAAAGAATTCAAGGCACCAAAAGATGGTACTTATACTTTCTCAGCTTATATTAAAACTTCAGGAAACACTGCTAATATAGCCAGACATATTCATTTAAACGGATCTTGGAATAAAGATACTTATAAGACTTTTAGAAATAACTTTGATTGGTTAAGAGATAGCTTCTCTGTAAACCTAAAAACTGGAGATACTATTTCTGCAAGATACGAATTACCAGGAGAAGGTATTTTATGGACCGCAGGCCATAAATGGGAAGAAGGTCCAGTAGCTACTCCATGGATGCCTTCCGCTTCCGAAGTCACAACTGCTGATTATCCAAAATACATTGGTCAATATACGAACTATATGGAAGTAGATAGTCCTAATCCTCAAGATTATACTTGGAGTCTAATTCGAGGGAACGATGGCAAGCAAGGTCCACAAGGTCCTAAAGGTGAAAGTGGTCCTCAAGGTTTACAGGGCCCTAAAGGCGACCAAGGAATCCCGGGACCAAAGGGTGAAGATGGTAAAACGCAGTATACCCATATAGCTTACGCTGATACTATTTCTGGTAGTGGATTTAGTCAAACAGATGTCAATAAACCATACATCGGAATGTACCAAGACTTCAATGCTGTTGATAGCCAAAACCCACAAGATTATCGTTGGAGCAAGTGGAAAGGTAGCGATGGACGAGATGGTATTCCGGGAAAACCGGGAGCTGACGGACGAACACCTTATGTTCACTTTGCCTATGCCGATAGTGCCGATGGTCAAAAGGGTTTCAGTTTAACCCAGACTGGCGCCAAGCGCTATTTAGGTGTGCTTACAAACTTCTTCAAAGAAGACAGTACTAATCCTTCTGATTACACGTGGAATGACACGGCTGGCAGTATATCCGTTGGTGGTCGGAACTTACTTGTAAAAACCAATCAAGGTATTACTAATTGGAATTGGCAGCTTTCCGATGGCGACAAGAGCGTTGAAGAAGTAAAAGTTGATGGCATTCGTGCTGTAAAACTAATCAAAGGTTCAACAACAGCAAACACTGGTTGGAATTTCATTGAATATAATGGCTTGCTGCGTGAACTCATACAGCCGAAGTCAAAGTATGTTCTTTCGTTCGATGTTAAACCAAGTGTTGATGTAACTTTCTATGCAACGCTAACAAATGGAGACTTTACAGAGACGCTGACTGATACTGTCGCTATGCATAAAGCATTAGCCAATCAGTGGAATAAGGTATCGTGCGTTTTGACAAGCAAAGAAACTTTGCCAAATATTGCATGGCAGACTGTATACTTAGCAGGTATGCCAACAACAAACGGCAATTGGGTAATAATTAAAAATATCAAACTTGAAGAAGGTGACATACCTACTCAGTGGACACCTGCAATTGAAGACATACAAGATGAAATTGATTCCAAAGCCGATTCTGCTATGACGACTGAACAGATTAATGCGCTTAATGAAAGGGCTGCAATTATTCAAGCAGAGACGGAAGCTAGAGCAAGCGCTGAAATTTTGAATAAATGGATTAAAAATTACCAAGATTTCGTCAAGGCAAACGAGACCGAGAGAGCTGCTGCCGAGAAAGCTTTGGTTAGCTCAAGTCAGCGGGTATCAACCATTGCTAAGGAGTTAGGTGAACTGTCTGATCGTTGGAATTTCATCGATACTTACATGAACACATCGAATGATGGGCTTGTGATTGGAAAGAATGACGGTAGCTCAAGCATTGTGTTCAACCCTAACGGTCGAATTTCAATGTATTCAGCAGGGTCTGAAGTTATGTATATTTCTCAAGGTGTAATCCACATCGAAAACGGTATCTTCTCGAAAACAATCCAAGTTGGTCGATATCGTGAGGAACAATACCATCTCAACCCAGACATGAATGTCATTCGTTATGTAGGAGGTTTTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)