Protein

View in Explore
Genbank accession
QEI23253.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTDITANVVVSNPRPIFTESRSFKAVANGKIYIGKIDTDPVNPANQIPVYIENEDGSHVQIAQPLIINSAGKIVYNGQLVKIVTVQGHSMAIYDAYGFQVDYIANVLKYDPDQLRQELAEPDGSKKVGYKDSNVYDTLNKLELKFKSFQEMRDDNSNEIGDYALLTGWHTEHQGYGAGVFQCVDKTGLTDDGGTIAVGSTYAWKRITGPGDATEFGVVPNAGSTFDNKAYILSAAATGALIFPAGDIYTTFFTLTDTYLVRGNSTNIREIEAPNVTDFIVHCSRNGTWEGRIDGIVWEDVSIFPIDTHRGFHTYFTTLGNMRSVRVKGGIGSWIEGSSDWSFFQCEFVESKGRENILITPKVDEQGTIGGGLVFNKCFIARSARDGASITQMPSVWFRDSVIYHNADTGLRFSTDRTTYPGPEFTVNKVTGCDIDDNYYAGVQITGGRYVDFSNNWVSSGRQSSGPGLSIDDSIGINIESNSVYLCGQNGITVKNSSFGSVSNNNSNDNKNTGIRIINCNRISVCGNIACGETPLGAFPKPQEEGIRVEGDRITTYGNICTGNSFENYSNTATNKQDGLNITS
Physico‐chemical
properties
protein length:583 AA
molecular weight: 63637,83460 Da
isoelectric point:4,95297
aromaticity:0,10120
hydropathy:-0,32967

Domains

Domains [InterPro]
IPR009093
ATT
1–113
IPR009093 IPR012334
IPR009093
ATT
1–100
IPR009093 DC_0717 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR036730
ATT
2–111
IPR036730 IPR011050
G3DSA:2.170.14.10:FF:000001
Unmapped
2–110
G3DSA:2.170.14.10:FF:000001 IPR039448
IPR036730
ATT
7–109
IPR036730 DC_2234
QEI23253.1
1 583
Architecture
ATT
STR
ATT 1-245 | STR 246-583
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEI23253.1
1 583
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,9938
Central domain 227 572 347 0,9964
C-terminal 573 583 10 0,2248
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-572
C-terminal
573-583

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SF6
[NCBI] 		2592207 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEI23253.1 [NCBI]
Genbank nucleotide accession
MK972689.1 [NCBI]
CDS location
range 6458 -> 8209
strand +
CDS
ATGACAGATATCACTGCCAACGTAGTTGTTTCTAACCCTCGTCCAATCTTCACTGAATCCCGTTCGTTTAAAGCTGTTGCTAATGGGAAAATTTACATTGGTAAGATAGATACCGATCCGGTTAATCCTGCTAATCAGATACCCGTATACATTGAAAATGAGGATGGATCTCACGTCCAGATTGCTCAGCCGCTAATTATCAACTCAGCCGGTAAAATCGTATACAACGGTCAACTGGTGAAAATTGTCACCGTTCAGGGTCATAGCATGGCTATCTATGATGCCTATGGTTTTCAGGTTGATTATATTGCTAACGTATTGAAGTATGACCCAGATCAGCTCCGACAAGAACTGGCTGAGCCGGATGGATCTAAAAAAGTAGGGTATAAAGACAGTAACGTATATGACACATTGAACAAGCTAGAATTAAAATTCAAATCATTCCAGGAAATGCGTGATGATAATTCAAATGAGATAGGCGATTACGCCCTACTCACAGGCTGGCATACAGAGCATCAGGGTTATGGTGCTGGCGTATTTCAGTGCGTCGATAAAACTGGCTTAACGGACGATGGTGGCACTATTGCGGTTGGCTCTACGTATGCGTGGAAACGTATCACGGGTCCGGGTGATGCTACTGAATTTGGTGTTGTGCCGAACGCCGGGAGTACGTTTGATAATAAAGCGTATATTTTATCAGCTGCGGCTACTGGGGCGCTTATCTTTCCAGCAGGTGATATTTATACAACATTCTTTACCCTTACTGATACCTACCTTGTGAGAGGTAATTCAACCAATATTCGCGAAATTGAAGCGCCAAATGTAACAGACTTTATTGTCCACTGCTCCAGAAACGGGACATGGGAAGGGCGAATTGACGGAATTGTATGGGAGGATGTTTCTATATTCCCTATTGATACCCATAGAGGTTTCCATACCTATTTTACTACCCTTGGTAATATGCGTAGTGTTAGAGTTAAAGGTGGTATTGGCTCCTGGATTGAGGGATCTTCTGATTGGTCATTTTTTCAATGTGAATTTGTTGAGTCAAAGGGAAGAGAAAATATTTTAATAACACCAAAAGTAGATGAGCAGGGGACTATAGGCGGCGGACTGGTATTCAACAAATGCTTCATCGCCAGAAGTGCTAGAGATGGTGCCAGTATAACTCAAATGCCATCTGTTTGGTTCAGAGATTCTGTTATTTATCATAACGCCGACACGGGCCTCCGCTTCAGCACAGATCGTACAACATATCCAGGACCTGAATTTACTGTTAACAAGGTTACTGGTTGTGACATAGATGATAATTACTATGCGGGTGTACAGATAACTGGTGGGCGTTATGTTGATTTCTCAAATAACTGGGTAAGTTCTGGTCGTCAATCTTCTGGGCCGGGATTAAGTATTGATGATAGTATAGGTATCAATATTGAAAGCAACAGCGTTTACCTTTGTGGACAAAACGGGATAACCGTAAAAAATAGTAGTTTTGGAAGTGTTAGTAATAATAACTCTAATGACAATAAAAATACTGGAATCCGCATTATTAACTGCAACCGCATTTCTGTCTGCGGTAATATAGCATGTGGTGAAACCCCATTAGGAGCCTTTCCAAAACCACAGGAAGAAGGTATAAGAGTAGAAGGTGACAGGATAACAACGTATGGCAATATATGCACAGGCAATTCATTTGAAAATTACTCTAATACAGCAACAAACAAGCAAGATGGTTTAAATATAACATCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea7f754767026841cc6bc0af1e44e0bac024e512d1da5264bdde3adb2c88a151
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8660
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank