Protein

View in Explore
Genbank accession
QEI23253.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,007
C2 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTDITANVVVSNPRPIFTESRSFKAVANGKIYIGKIDTDPVNPANQIPVYIENEDGSHVQIAQPLIINSAGKIVYNGQLVKIVTVQGHSMAIYDAYGFQVDYIANVLKYDPDQLRQELAEPDGSKKVGYKDSNVYDTLNKLELKFKSFQEMRDDNSNEIGDYALLTGWHTEHQGYGAGVFQCVDKTGLTDDGGTIAVGSTYAWKRITGPGDATEFGVVPNAGSTFDNKAYILSAAATGALIFPAGDIYTTFFTLTDTYLVRGNSTNIREIEAPNVTDFIVHCSRNGTWEGRIDGIVWEDVSIFPIDTHRGFHTYFTTLGNMRSVRVKGGIGSWIEGSSDWSFFQCEFVESKGRENILITPKVDEQGTIGGGLVFNKCFIARSARDGASITQMPSVWFRDSVIYHNADTGLRFSTDRTTYPGPEFTVNKVTGCDIDDNYYAGVQITGGRYVDFSNNWVSSGRQSSGPGLSIDDSIGINIESNSVYLCGQNGITVKNSSFGSVSNNNSNDNKNTGIRIINCNRISVCGNIACGETPLGAFPKPQEEGIRVEGDRITTYGNICTGNSFENYSNTATNKQDGLNITS
Physico‐chemical
properties
protein length:583 AA
molecular weight: 63637,83460 Da
isoelectric point:4,95297
aromaticity:0,10120
hydropathy:-0,32967

Domains

View on InterPro
Domain architecture
QEI23253.1
1 583 aa
ATT 1–113 · STR 211–583
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QEI23253.1
1 583 aa
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,9938
Central domain 227 572 347 0,9964
C-terminal 573 583 10 0,2248
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage SF6 [NCBI] · taxon 2592207
Uroviricota Caudoviricetes Lederbergvirus Salmonella phage SF6
Host
Salmonella sp. [NCBI] · taxon 599
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella sp.

Coding sequence (CDS)

Genbank protein accession
QEI23253.1 [NCBI]
Genbank nucleotide accession
MK972689.1 [NCBI]
CDS location
range 6458 -> 8209
strand +
CDS
ATGACAGATATCACTGCCAACGTAGTTGTTTCTAACCCTCGTCCAATCTTCACTGAATCCCGTTCGTTTAAAGCTGTTGCTAATGGGAAAATTTACATTGGTAAGATAGATACCGATCCGGTTAATCCTGCTAATCAGATACCCGTATACATTGAAAATGAGGATGGATCTCACGTCCAGATTGCTCAGCCGCTAATTATCAACTCAGCCGGTAAAATCGTATACAACGGTCAACTGGTGAAAATTGTCACCGTTCAGGGTCATAGCATGGCTATCTATGATGCCTATGGTTTTCAGGTTGATTATATTGCTAACGTATTGAAGTATGACCCAGATCAGCTCCGACAAGAACTGGCTGAGCCGGATGGATCTAAAAAAGTAGGGTATAAAGACAGTAACGTATATGACACATTGAACAAGCTAGAATTAAAATTCAAATCATTCCAGGAAATGCGTGATGATAATTCAAATGAGATAGGCGATTACGCCCTACTCACAGGCTGGCATACAGAGCATCAGGGTTATGGTGCTGGCGTATTTCAGTGCGTCGATAAAACTGGCTTAACGGACGATGGTGGCACTATTGCGGTTGGCTCTACGTATGCGTGGAAACGTATCACGGGTCCGGGTGATGCTACTGAATTTGGTGTTGTGCCGAACGCCGGGAGTACGTTTGATAATAAAGCGTATATTTTATCAGCTGCGGCTACTGGGGCGCTTATCTTTCCAGCAGGTGATATTTATACAACATTCTTTACCCTTACTGATACCTACCTTGTGAGAGGTAATTCAACCAATATTCGCGAAATTGAAGCGCCAAATGTAACAGACTTTATTGTCCACTGCTCCAGAAACGGGACATGGGAAGGGCGAATTGACGGAATTGTATGGGAGGATGTTTCTATATTCCCTATTGATACCCATAGAGGTTTCCATACCTATTTTACTACCCTTGGTAATATGCGTAGTGTTAGAGTTAAAGGTGGTATTGGCTCCTGGATTGAGGGATCTTCTGATTGGTCATTTTTTCAATGTGAATTTGTTGAGTCAAAGGGAAGAGAAAATATTTTAATAACACCAAAAGTAGATGAGCAGGGGACTATAGGCGGCGGACTGGTATTCAACAAATGCTTCATCGCCAGAAGTGCTAGAGATGGTGCCAGTATAACTCAAATGCCATCTGTTTGGTTCAGAGATTCTGTTATTTATCATAACGCCGACACGGGCCTCCGCTTCAGCACAGATCGTACAACATATCCAGGACCTGAATTTACTGTTAACAAGGTTACTGGTTGTGACATAGATGATAATTACTATGCGGGTGTACAGATAACTGGTGGGCGTTATGTTGATTTCTCAAATAACTGGGTAAGTTCTGGTCGTCAATCTTCTGGGCCGGGATTAAGTATTGATGATAGTATAGGTATCAATATTGAAAGCAACAGCGTTTACCTTTGTGGACAAAACGGGATAACCGTAAAAAATAGTAGTTTTGGAAGTGTTAGTAATAATAACTCTAATGACAATAAAAATACTGGAATCCGCATTATTAACTGCAACCGCATTTCTGTCTGCGGTAATATAGCATGTGGTGAAACCCCATTAGGAGCCTTTCCAAAACCACAGGAAGAAGGTATAAGAGTAGAAGGTGACAGGATAACAACGTATGGCAATATATGCACAGGCAATTCATTTGAAAATTACTCTAATACAGCAACAAACAAGCAAGATGGTTTAAATATAACATCTTGA

Genome Context

Tertiary structure

QEI23253.1
ESMFold structure
Source ESMFold
pLDDT 86.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank