Protein

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Genbank accession
QEI23253.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MTDITANVVVSNPRPIFTESRSFKAVANGKIYIGKIDTDPVNPANQIPVYIENEDGSHVQIAQPLIINSAGKIVYNGQLVKIVTVQGHSMAIYDAYGFQVDYIANVLKYDPDQLRQELAEPDGSKKVGYKDSNVYDTLNKLELKFKSFQEMRDDNSNEIGDYALLTGWHTEHQGYGAGVFQCVDKTGLTDDGGTIAVGSTYAWKRITGPGDATEFGVVPNAGSTFDNKAYILSAAATGALIFPAGDIYTTFFTLTDTYLVRGNSTNIREIEAPNVTDFIVHCSRNGTWEGRIDGIVWEDVSIFPIDTHRGFHTYFTTLGNMRSVRVKGGIGSWIEGSSDWSFFQCEFVESKGRENILITPKVDEQGTIGGGLVFNKCFIARSARDGASITQMPSVWFRDSVIYHNADTGLRFSTDRTTYPGPEFTVNKVTGCDIDDNYYAGVQITGGRYVDFSNNWVSSGRQSSGPGLSIDDSIGINIESNSVYLCGQNGITVKNSSFGSVSNNNSNDNKNTGIRIINCNRISVCGNIACGETPLGAFPKPQEEGIRVEGDRITTYGNICTGNSFENYSNTATNKQDGLNITS
Physico‐chemical
properties
protein length:583 AA
molecular weight: 63637,83460 Da
isoelectric point:4,95297
aromaticity:0,10120
hydropathy:-0,32967

Domains

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SF6
[NCBI] 		2592207 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEI23253.1 [NCBI]
Genbank nucleotide accession
MK972689.1 [NCBI]
CDS location
range 6458 -> 8209
strand +
CDS
ATGACAGATATCACTGCCAACGTAGTTGTTTCTAACCCTCGTCCAATCTTCACTGAATCCCGTTCGTTTAAAGCTGTTGCTAATGGGAAAATTTACATTGGTAAGATAGATACCGATCCGGTTAATCCTGCTAATCAGATACCCGTATACATTGAAAATGAGGATGGATCTCACGTCCAGATTGCTCAGCCGCTAATTATCAACTCAGCCGGTAAAATCGTATACAACGGTCAACTGGTGAAAATTGTCACCGTTCAGGGTCATAGCATGGCTATCTATGATGCCTATGGTTTTCAGGTTGATTATATTGCTAACGTATTGAAGTATGACCCAGATCAGCTCCGACAAGAACTGGCTGAGCCGGATGGATCTAAAAAAGTAGGGTATAAAGACAGTAACGTATATGACACATTGAACAAGCTAGAATTAAAATTCAAATCATTCCAGGAAATGCGTGATGATAATTCAAATGAGATAGGCGATTACGCCCTACTCACAGGCTGGCATACAGAGCATCAGGGTTATGGTGCTGGCGTATTTCAGTGCGTCGATAAAACTGGCTTAACGGACGATGGTGGCACTATTGCGGTTGGCTCTACGTATGCGTGGAAACGTATCACGGGTCCGGGTGATGCTACTGAATTTGGTGTTGTGCCGAACGCCGGGAGTACGTTTGATAATAAAGCGTATATTTTATCAGCTGCGGCTACTGGGGCGCTTATCTTTCCAGCAGGTGATATTTATACAACATTCTTTACCCTTACTGATACCTACCTTGTGAGAGGTAATTCAACCAATATTCGCGAAATTGAAGCGCCAAATGTAACAGACTTTATTGTCCACTGCTCCAGAAACGGGACATGGGAAGGGCGAATTGACGGAATTGTATGGGAGGATGTTTCTATATTCCCTATTGATACCCATAGAGGTTTCCATACCTATTTTACTACCCTTGGTAATATGCGTAGTGTTAGAGTTAAAGGTGGTATTGGCTCCTGGATTGAGGGATCTTCTGATTGGTCATTTTTTCAATGTGAATTTGTTGAGTCAAAGGGAAGAGAAAATATTTTAATAACACCAAAAGTAGATGAGCAGGGGACTATAGGCGGCGGACTGGTATTCAACAAATGCTTCATCGCCAGAAGTGCTAGAGATGGTGCCAGTATAACTCAAATGCCATCTGTTTGGTTCAGAGATTCTGTTATTTATCATAACGCCGACACGGGCCTCCGCTTCAGCACAGATCGTACAACATATCCAGGACCTGAATTTACTGTTAACAAGGTTACTGGTTGTGACATAGATGATAATTACTATGCGGGTGTACAGATAACTGGTGGGCGTTATGTTGATTTCTCAAATAACTGGGTAAGTTCTGGTCGTCAATCTTCTGGGCCGGGATTAAGTATTGATGATAGTATAGGTATCAATATTGAAAGCAACAGCGTTTACCTTTGTGGACAAAACGGGATAACCGTAAAAAATAGTAGTTTTGGAAGTGTTAGTAATAATAACTCTAATGACAATAAAAATACTGGAATCCGCATTATTAACTGCAACCGCATTTCTGTCTGCGGTAATATAGCATGTGGTGAAACCCCATTAGGAGCCTTTCCAAAACCACAGGAAGAAGGTATAAGAGTAGAAGGTGACAGGATAACAACGTATGGCAATATATGCACAGGCAATTCATTTGAAAATTACTCTAATACAGCAACAAACAAGCAAGATGGTTTAAATATAACATCTTGA

Tertiary structure

PDB ID
ea7f754767026841cc6bc0af1e44e0bac024e512d1da5264bdde3adb2c88a151
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8660
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank