Phage RBP Database

UniProt accession

V6F932 [UniProt]

Protein name

Putative tail collar protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,98

Seq2Symm

C3 confidence 0,944

C3	0,944
C1	0,204
D3	0,006

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MPRDSNGNTNPLPGTIVQTGDTILPSQHNPALVDLYAMMTQSLSRDGQGGMRANLAMNGFQVTGLGNATQPGNAVPLSQFQSGTPVGAVIDYAGVNPPNTWQFCFGQAIEVSAYPDFVAACYVGNALNATAGFGYRTTSQTDPSNNRSTSGQFIVLPDLRGRVGAGKDDMGGSAANRVTTTGSGINGALIGSNGGEQNSTLTIYQIPNHDHGGSTGNGFGSYTILNVLKNLTGNLSLSAYGQVGFTNENIPFSTHNHPISPQGGGLPHNNMQPTVIINKIIKVSY

Physico‐chemical properties

protein length:	285 AA
molecular weight:	29632,50550 Da
isoelectric point:	6,26550
aromaticity:	0,07018
hydropathy:	-0,27018

Domain architecture

V6F932

1 285 aa

ATT 81–164 · STR 165–283 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF88874
STR

SSF88874

IPR037053
ATT

IPR037053

V6F932

1285 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0363
ATT

DC_0363

V6F932

1285 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF88874	STR	SSF88874	81	283	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	83	164	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits

Proteins with similar domain architecture

Phage

Brucella phage F1 [NCBI] · taxon 1401446

Uroviricota Caudoviricetes Perisivirus Perisivirus Tb

Host

Brucella sp. [NCBI] · taxon 52132

Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae Brucella Brucella sp.

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)