Protein

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Genbank accession
QIG70092.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,73
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,98
Seq2Symm
C1 confidence 0,998
C1 0,998
C2 0,001
C3 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSLHVKQAGAWSTVQNLYVNQSGVWVPVQYAYVKNAGAWVQYYSSEVVVTLAANTNNVNISTLFTSAVWTSSTNKRVVINSGVTIGSTSSGTPAMRTGVSWGGLLTIENAGTIQGAGGAGNSGAGGHALIADASGVIVKNTGIIRSGGGGGGHGGNGGNGYYTYTISEGPAYAGYPANGGSRYYWQTQNGTSIDSAYWNNANLFSGNVDSPVTVNGFTYTRGVQRASYTSGSSSFKVFEISRSYQATAYTSGGAGGDGGRGQGADGSAAAGSAGSGGGTNAGTGGTGGTGGAYGANGSTGNSGSAGNNGSGTAGTTGGLAGISYNVANISMTNTGTITGRTS
Physico‐chemical
properties
protein length:342 AA
molecular weight: 33604,74690 Da
isoelectric point:9,29952
aromaticity:0,09064
hydropathy:-0,21930

Domains

View on InterPro
Domain architecture
QIG70092.1
1 342 aa
RBD 46–181 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QIG70092.1
1 342 aa
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,1415
Central domain 60 264 206 0,9515
C-terminal 265 342 77 0,1501
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Rhizobium phage RHph_Y2_7 [NCBI] · taxon 2509582
Uroviricota Caudoviricetes Autographivirales Rhizobium phage RHph_Y2_7
Host
Rhizobium etli [NCBI] · taxon 29449
Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Rhizobium Rhizobium etli

Coding sequence (CDS)

Genbank protein accession
QIG70092.1 [NCBI]
Genbank nucleotide accession
MN988514.1 [NCBI]
CDS location
range 38685 -> 39713
strand +
CDS
ATGAGCCTGCATGTAAAGCAAGCAGGAGCATGGTCCACAGTGCAGAACCTGTACGTCAACCAATCTGGCGTATGGGTTCCTGTACAATACGCGTATGTAAAGAACGCGGGCGCATGGGTGCAATACTATTCGTCGGAAGTAGTCGTTACTCTAGCGGCGAACACCAATAACGTCAACATATCGACGTTGTTCACCTCTGCGGTATGGACTAGCTCCACGAACAAGCGTGTCGTCATTAACTCTGGCGTCACCATTGGCTCTACCTCATCTGGCACTCCCGCAATGCGTACGGGTGTAAGTTGGGGCGGACTACTGACAATTGAGAATGCCGGTACTATCCAAGGTGCTGGCGGTGCTGGCAACTCAGGTGCTGGCGGTCATGCACTGATAGCTGATGCATCGGGCGTAATCGTCAAGAATACCGGCATTATCCGCTCTGGCGGTGGTGGCGGCGGTCACGGTGGTAACGGTGGCAATGGCTACTACACCTACACCATATCGGAGGGACCGGCTTATGCTGGTTATCCGGCGAATGGCGGCAGCCGTTACTACTGGCAAACCCAGAACGGCACAAGTATCGACAGCGCGTACTGGAACAATGCCAACCTATTCAGTGGTAACGTAGACAGTCCGGTTACGGTTAATGGCTTCACGTACACTCGCGGCGTACAGCGCGCAAGCTACACGAGTGGAAGTAGCTCATTCAAAGTATTCGAAATCAGCCGGTCGTACCAAGCCACAGCCTACACTTCGGGTGGTGCAGGTGGCGACGGCGGGCGCGGCCAAGGCGCAGACGGATCGGCAGCAGCCGGTTCTGCGGGTTCCGGTGGCGGCACTAATGCTGGTACTGGCGGTACTGGCGGAACGGGTGGAGCGTATGGCGCGAACGGCTCAACGGGCAATAGCGGCAGTGCTGGCAATAACGGCTCTGGTACAGCCGGAACTACCGGCGGCCTCGCTGGTATTAGCTATAACGTTGCTAACATTAGCATGACAAACACAGGCACAATCACGGGACGAACATCATGA

Genome Context

Tertiary structure

QIG70092.1
ESMFold structure
Source ESMFold
pLDDT 72.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank