Protein

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Genbank accession
XRQ88057.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARQQANLEYNQFQSGLITEGNILNLPIDSFREGENFILSKANAWERRKGLGLEDSGTLYPSYVDFSDPTLVSSVHVWQTHYSAIPEILVVQFGDKLHFFDTSVDPLSNGKLFINNQEFLTTEGTTEDIISGASVEGIFVFATQDADPISLQITDIQSDSITARTKIVVDRKVLFLETRDVWGRSAPSKERPKTLSSDYLYELINQGWDTEKINSTYATIGAYPSGYDIWWLYKTTAGTDANAIGKFTPSRMKDSATTGIGQERQNTPAPRGSTVASLQVLASGKPSCIQTFAGRVFYAGFQATPRTIDDVRPDFRNHVFFSQLVKSNAEINKCYQFADPTSEVDSALVDTDGGFIKINAARKIVAMEEVSSGLFIIAENGVWLLSGTSDGLFSATGYHVDKITDYGCVSPRSVVAYGDTVFYWAEEGIIVLSPDQTTGKHSAQNLTELKIQSLYNELTTSSKVKSVGTVERTDKYVRWLVSENANPNNFDLEIIFSLRYGAFFINRFKSDITVAERVTGYVPERNVIGNKVVSDYFIVAGIDRVKVESADVTVPLGRRIGDEEFRDTKYLTIKSDDDSFGFYSFNQDNFKDFGLVDAEAYLLSAPQKLDDTQRRKQITSLATHMLRTDTWFKDIDGEVTRENESSMLLRIRWDFTDSPTGNKWTDITRHSQCYRYRRPMNLKQGINVYPYEVITARERIRGSGTAFQFEFRTEPNKDCKLLGWAVTVSGGTKV
Physico‐chemical
properties
protein length:734 AA
molecular weight: 82389,21790 Da
isoelectric point:5,22887
aromaticity:0,11172
hydropathy:-0,35136

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRQ88057.1
1 734
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9748
Central domain 161 359 200 0,2043
C-terminal 360 734 374 0,1841
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-359
C-terminal
360-734

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Rostov-5342
[NCBI] 		3414238 Viruses >
Host Vibrio cholerae O1 El Tor
[NCBI] 		172918 Chordata > Actinopteri > Cypriniformes > Cyprinidae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRQ88057.1 [NCBI]
Genbank nucleotide accession
PV403752 [NCBI]
CDS location
range 24153 -> 26357
strand -
CDS
ATGGCAAGACAACAGGCTAATCTAGAATACAATCAGTTTCAGTCTGGTCTAATCACAGAAGGGAACATTCTAAATCTGCCTATTGATTCTTTCAGAGAGGGTGAGAACTTCATCCTCTCAAAAGCTAACGCTTGGGAAAGACGCAAAGGTTTGGGTTTGGAAGATTCAGGTACTTTGTATCCTTCCTACGTAGACTTCTCAGACCCAACTTTAGTATCTAGTGTTCACGTATGGCAAACTCACTACAGTGCCATTCCAGAGATTCTAGTAGTACAGTTCGGTGATAAATTACATTTCTTTGATACTTCTGTTGACCCGTTATCTAACGGGAAATTGTTTATTAACAACCAAGAATTTTTAACCACAGAAGGTACAACAGAGGATATTATTAGTGGTGCCTCGGTAGAGGGTATCTTTGTATTTGCAACACAGGATGCAGACCCTATATCACTCCAGATTACGGATATTCAATCAGACTCAATCACTGCCCGTACTAAAATCGTAGTAGATAGAAAGGTTCTGTTCCTTGAAACTCGTGATGTGTGGGGACGTTCGGCTCCAAGTAAAGAACGGCCAAAAACTCTATCGTCAGATTATCTGTACGAGCTAATTAACCAAGGTTGGGATACTGAAAAGATTAACTCAACTTATGCCACAATCGGTGCTTATCCTAGTGGCTATGATATTTGGTGGTTATATAAAACAACTGCTGGTACAGACGCTAACGCAATTGGAAAGTTTACTCCAAGTCGGATGAAAGACAGTGCAACTACCGGTATCGGTCAGGAACGTCAAAACACTCCTGCACCTCGTGGCTCTACGGTAGCATCGTTACAAGTGTTAGCTAGTGGTAAACCTTCTTGCATTCAAACATTCGCAGGTCGAGTATTCTATGCAGGATTCCAAGCAACCCCAAGAACAATTGATGATGTACGTCCCGATTTCCGTAATCACGTATTCTTCTCACAGTTAGTTAAATCTAACGCAGAGATTAACAAGTGTTATCAGTTTGCTGACCCAACAAGTGAAGTAGACAGTGCTCTTGTTGATACAGATGGAGGCTTTATCAAAATCAACGCAGCTCGTAAGATTGTTGCAATGGAAGAAGTTTCCAGTGGCCTGTTTATCATTGCTGAAAACGGTGTGTGGTTGTTGAGTGGTACGTCAGATGGTTTGTTCTCTGCTACGGGTTATCACGTAGACAAGATTACTGACTACGGTTGTGTGTCTCCACGTTCTGTTGTGGCATATGGTGATACCGTTTTCTATTGGGCAGAAGAAGGGATTATTGTCCTATCTCCAGACCAAACAACTGGAAAACATTCTGCACAGAATCTAACAGAACTAAAGATTCAATCCTTATATAATGAGTTAACTACTTCTAGTAAGGTTAAGTCGGTAGGTACTGTAGAACGTACAGATAAATATGTTCGTTGGCTAGTTAGTGAAAATGCCAACCCTAATAACTTTGACCTAGAGATTATCTTTAGCTTGCGTTATGGTGCATTCTTCATTAACCGGTTCAAGAGTGACATTACTGTAGCAGAACGAGTTACCGGATATGTTCCAGAACGTAACGTTATTGGCAACAAGGTAGTTAGTGATTACTTCATCGTTGCCGGTATCGACAGGGTTAAAGTTGAGTCTGCGGATGTTACAGTCCCATTGGGACGTAGAATTGGTGACGAAGAGTTCCGAGATACTAAGTATCTAACAATCAAAAGTGATGATGATTCGTTTGGATTCTATTCGTTTAACCAAGATAACTTTAAAGACTTCGGCCTAGTTGATGCAGAGGCTTACTTGTTAAGTGCTCCACAGAAGTTAGACGATACCCAACGCCGGAAACAAATCACAAGTCTAGCAACTCACATGCTCCGTACTGATACTTGGTTCAAAGATATAGATGGAGAAGTTACCAGAGAAAACGAGTCTAGTATGTTACTACGTATTCGTTGGGACTTCACCGACTCTCCTACAGGCAACAAGTGGACTGACATTACTCGCCACAGTCAGTGCTACCGTTACCGTAGACCGATGAATCTTAAACAAGGTATCAATGTGTACCCTTATGAAGTAATCACGGCCAGAGAGCGAATCAGAGGCTCAGGAACGGCATTCCAGTTTGAGTTCCGAACAGAGCCAAACAAGGATTGTAAGTTGTTAGGTTGGGCAGTAACCGTTAGTGGAGGTACTAAGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
33229f87d5ac673d6fab75ea44b5202f66d8532a3345377c54d564ddd67c6f8a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6178
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50