Protein

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Genbank accession
XWX23694.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MANFLKNLHPLLRRDRNKKDNQDPNFALIDALNEEMNQVEKDAIESKLQSSLKTSTSEYLDKFGDWFGVYRKTDEKDDVYRARIIKYLLLKRGTNNAIIDAIKDYLGRDDIDVSVYEPFTNIFYTNKSHLNGEDHLMGYYYRFAVINVSIGDYFPVEIIDVINEFKPAGVTLYVTYDGASTIRGGAIIKWLDGLPKIETYQEFDRFTGYDDTFYGHINMNQSKDTDNSSSDIFKTNHSLINSLDVLTGSSSVGRQYINYGYVTSYVYNPGMTSSVNQISASTKGRGQEVPTDYYMYTSTKNNNTVELSMQTTSGVSYLYNNFNFRDYMSKYRPQVDLQSDEARRIVSDYIKELSIDYYLSAVIPPDESIEIKLQVYDFSINRWLTVSINNLSFYEKNIGSNIGYIKDYLNSELNMFTRLEINAGKRDSVDIKVNYLDLMFYYYERGIYTIKPYKALIENYLDISRETYVEAFKIASLSNGDIITKTGFQPIGYLKLVGNYENTIPSTINIVAKDTDNNPIESNELDVYNTVENRNLLQSYKGVNTIAREITSTKEFTVSGWAKEIYSTNYLSKVLKPGKVYTLSFDMEITGNDPTLKSYSDSHGIYLYSNTKGIVVNGVKSMERTIGNKVSVTQTFTAPTITDHRLLIYTGRYTSDGKASTPPVFFNTVKITELKLTEGSSKLEYSPAPEDKPNVIEKGIKFNNILTNIQTLSINSDTILKNVTLYYSYYGDSWVELKTLGNISTGETTETNNLIDLYGLQTVDYSNINPMSKVSLRSIWNVKLGELNNQEGSLYNMPNDYFNAVWQDIDKLSDIELGSMRMVKDTEGGVFDGATGEIIKATLFNVGAYTDLDMLAYTLTNYTEPLTLGSSRLIIELKEELLTSESFNVDNRIKVIDSIYEELPNTSIIKNGFVEREVTGSKYLDYGLYEPIEDGTRYKLIVEGEFKDNIEFISLYNSNPNFNETFIYPSEIINGVAEKEFIAKPSTEDKPRLNTDVRIYIRPYDSTISKVRRVELRKV
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 116350,17860 Da
isoelectric point:4,95780
aromaticity:0,11776
hydropathy:-0,42954

Domains

Domains [InterPro]
IPR060691
STR
27–120
IPR060691 DC_1746
Coil
Unmapped
29–49
Coil
XWX23694.1
1 1019
Architecture
STR
STR
STR 27-120 | STR 464-780 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX23694.1
1 1019
Domain Start End Length (AA) Confidence
N-terminal 1 638 638 0,6250
Central domain 639 928 291 0,2295
C-terminal 929 1019 90 0,1922
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-638
Central
639-928
C-terminal
929-1019

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage EMS22-2
[NCBI] 		3440216 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX23694.1 [NCBI]
Genbank nucleotide accession
PV775412 [NCBI]
CDS location
range 74936 -> 77995
strand +
CDS
GTGGCTAATTTTTTAAAGAATCTTCATCCATTATTAAGAAGAGATAGAAATAAAAAAGATAATCAAGACCCTAACTTTGCTCTGATAGATGCACTCAATGAAGAGATGAATCAAGTAGAGAAAGATGCTATAGAAAGTAAGTTACAATCTTCTCTAAAGACATCTACCAGTGAATATTTAGATAAGTTTGGGGATTGGTTCGGAGTTTATCGTAAGACCGATGAGAAAGATGATGTTTATAGAGCAAGAATTATAAAATATTTACTCTTGAAAAGAGGAACTAATAATGCTATAATAGATGCTATAAAAGATTATTTAGGTAGAGATGATATTGATGTAAGTGTATATGAACCTTTTACAAATATTTTCTATACTAACAAATCACATTTAAATGGTGAAGACCACTTAATGGGATACTATTATAGATTTGCTGTTATTAATGTCTCTATAGGTGATTATTTCCCTGTAGAGATTATAGATGTAATTAATGAATTCAAACCTGCAGGTGTAACTCTATATGTCACTTATGATGGGGCTTCTACTATTAGAGGTGGAGCAATTATTAAGTGGTTAGATGGGTTACCTAAAATAGAAACATACCAAGAGTTTGATAGATTTACAGGTTATGATGATACATTCTATGGTCATATTAATATGAATCAAAGTAAAGATACTGATAACAGTTCATCAGATATTTTTAAAACAAACCATAGCTTAATTAATAGTTTAGATGTTTTAACAGGTTCATCTAGTGTAGGGAGACAGTATATTAACTACGGATATGTAACATCATATGTTTATAATCCAGGTATGACATCTTCTGTAAATCAAATAAGCGCTAGTACAAAAGGTAGAGGTCAAGAAGTACCTACTGACTATTATATGTATACTAGTACTAAGAATAACAATACAGTAGAACTTAGTATGCAAACTACTTCCGGTGTGTCTTATTTATATAATAACTTTAATTTTAGGGACTATATGAGTAAATATAGACCTCAAGTAGATTTACAATCTGATGAGGCTAGAAGAATTGTATCTGATTATATAAAAGAATTAAGTATTGATTACTATCTTAGTGCTGTGATACCTCCTGATGAAAGTATAGAAATTAAACTACAAGTTTATGATTTTTCTATTAATAGATGGCTTACAGTATCAATTAATAATTTATCTTTCTATGAAAAAAATATCGGGAGCAATATAGGATATATAAAAGATTATCTAAACAGTGAATTAAATATGTTTACTAGGTTAGAGATAAATGCAGGTAAAAGAGATTCAGTAGATATTAAAGTTAATTACTTAGATTTAATGTTTTATTACTATGAACGAGGTATTTATACAATAAAACCGTATAAAGCATTAATAGAAAATTATTTAGATATATCTAGAGAGACTTATGTAGAAGCATTTAAAATAGCATCATTATCTAATGGAGATATTATAACTAAAACAGGTTTTCAGCCTATAGGGTATTTAAAACTAGTTGGTAATTATGAAAATACAATACCTAGCACAATAAATATAGTAGCTAAAGATACAGATAATAACCCTATAGAATCTAATGAATTAGATGTATATAATACAGTAGAGAATAGAAATTTATTACAATCTTATAAAGGTGTAAATACGATAGCTAGAGAAATAACTTCTACAAAAGAGTTTACTGTATCAGGATGGGCTAAAGAGATATACTCAACTAATTATCTTTCTAAAGTATTAAAACCAGGTAAAGTGTATACGTTATCTTTTGATATGGAAATAACAGGTAATGACCCAACTCTTAAATCTTATTCTGATAGTCATGGTATATATTTATACAGTAATACTAAGGGAATTGTTGTTAATGGTGTTAAATCTATGGAACGTACTATAGGTAACAAAGTATCCGTAACTCAAACTTTTACAGCCCCTACTATTACTGACCATAGATTACTAATATATACTGGAAGATATACATCTGATGGTAAAGCATCAACTCCTCCAGTGTTCTTTAATACAGTTAAAATTACGGAATTAAAATTGACTGAGGGTTCTTCTAAGCTAGAGTACTCACCTGCTCCGGAAGATAAACCTAACGTAATAGAAAAAGGAATTAAATTTAATAATATCCTAACTAATATACAGACTTTAAGTATTAATTCGGATACTATCTTAAAAAATGTAACTTTATATTATTCTTACTATGGTGATAGTTGGGTAGAACTAAAGACTCTAGGAAATATTAGTACTGGAGAAACAACAGAAACCAATAACTTAATAGATTTATATGGATTACAGACAGTAGATTATTCTAATATAAATCCAATGTCTAAAGTATCATTACGTTCCATTTGGAATGTTAAGCTAGGTGAATTGAACAATCAAGAAGGTTCTTTATATAATATGCCTAATGATTACTTTAATGCTGTATGGCAGGATATAGATAAATTATCAGATATTGAGCTAGGTTCTATGAGAATGGTTAAAGACACTGAGGGCGGAGTATTCGATGGAGCTACAGGTGAAATTATTAAGGCTACTCTATTTAATGTCGGTGCTTATACTGATTTAGATATGTTAGCCTATACTTTGACTAATTATACTGAACCGTTAACGTTAGGCTCTAGTCGATTAATAATTGAGCTAAAAGAAGAACTACTAACATCAGAATCATTTAATGTCGATAATAGAATTAAAGTAATTGACTCAATATATGAGGAGTTACCAAATACAAGCATTATTAAAAATGGATTTGTTGAAAGAGAAGTTACAGGTTCTAAATATTTAGATTACGGTTTATATGAGCCTATAGAAGATGGTACTAGATATAAACTTATTGTCGAAGGAGAATTTAAAGATAATATAGAATTTATATCTTTATACAATTCTAACCCTAACTTTAATGAAACATTTATATATCCATCAGAGATAATTAATGGAGTTGCTGAAAAAGAATTTATTGCAAAACCATCTACTGAAGACAAACCAAGGTTAAATACAGATGTTAGAATATATATACGACCTTATGATTCAACTATCTCTAAAGTAAGAAGAGTAGAATTAAGGAAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
887a0605ee3d18243fa8f8d2b1cb6d24510bcf5b40e7dc7117ffa9d3d75b9bf0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of phage formulation for phagotherapy against mastitis infections, evaluation of efficacy with in vitro and in vivo applications Dalgic,C., Tasdurmazli,S., Erdogdu,B. and Ozbek,T. 2020 — GenBank