Protein

Experimentally validated
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Genbank accession
YP_009210647.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,89
Seq2Symm
C3 confidence 0,999
C3 0,999
C1 0,023
D3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAAKTEPRGGLQYGWAYGENGWNVGMDNNLLRLGRFGVHLSVKDRDLVTPPATPADGDTYIVAGVATDAWVGQEGRVAVWSQADNAWAFAVPRLGWVAYVEDEEKLTAYKAAGWSAGIAI
Physico‐chemical
properties
protein length:120 AA
molecular weight: 12925,30320 Da
isoelectric point:4,80815
aromaticity:0,11667
hydropathy:-0,15250

Taxonomy

Phage
Pseudomonas phage PaMx28 [NCBI] · taxon 1175659
Uroviricota Caudoviricetes Mesyanzhinovviridae Pamexvirus Pamexvirus PaMx28
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa

Coding sequence (CDS)

Genbank protein accession
YP_009210647.1 [NCBI]
Genbank nucleotide accession
NC_028931 [NCBI]
CDS location
range 30817 -> 31179
strand +
CDS
ATGGCAGCAAAGACAGAGCCCCGCGGCGGGCTCCAATACGGTTGGGCCTACGGCGAGAACGGCTGGAACGTGGGCATGGACAACAACCTGCTCCGGCTGGGGCGCTTCGGCGTCCACCTGTCGGTCAAGGACCGCGACCTCGTCACTCCGCCCGCGACGCCTGCAGACGGCGACACCTACATCGTGGCGGGCGTCGCGACCGACGCCTGGGTCGGGCAGGAGGGCCGCGTGGCCGTCTGGTCACAGGCCGACAACGCCTGGGCCTTCGCCGTGCCGCGCCTGGGCTGGGTGGCGTACGTTGAGGACGAGGAGAAGCTGACTGCCTACAAGGCCGCCGGCTGGTCCGCCGGCATTGCCATCTGA

Genome Context

Tertiary structure

YP_009210647.1
ESMFold2 structure
Source ESMFold2
pLDDT 94.5
Oligomeric state monomer
Download structure

Experimental validation

Experimentally validated

A wet-lab result is recorded for this protein, or for its sequence: a solved structure, an experimental GO annotation, a UniProt ECO:0000269 assertion, or a GenBank /experiment= qualifier.

Tier Source Assay Claim Reference
Experimentally validated GenBank
YP_009210647.1
 experiment:proteomics:MS virion structural protein – EXISTENCE:Mass spectrometry —
Validated by sequence identity GenBank
ALH23635.1
 experiment:proteomics:MS virion structural protein – EXISTENCE:Mass spectrometry —

Rows marked “Validated by sequence identity” come from a different entry carrying the same sequence — the experiment was not performed on this protein.