Phage RBP Database

Genbank accession

AGH06985.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MAQNTNLNVTPYYDDFDKDKNFYRVLFRPGFPIQARELTTMQSILQNQVENVGSHLFKDGAMVIPGQVGYDLNVAAIMLQESFLGADVEEYRTQLNGKIIEGLTTGVKAKVLYSISSTESDKGYITLYVKYIESGGVNANQETFQNNEQLITDVEITFGTTLIEVGSPFAQLLPTAALQVGSVAYVQSGVYFIRGFFVDVDYQYILLDQYGSNPSYRIGLDIQESIVTPEDDLSLNDNAAGTSNYAAPGAHRFRITTRLIKKLLTDDADKNFIELLRINASKVEKLVDRSAYEELEKGLALRTYEESGNYVVRDFAIKVRENLDDGFNNGVFAKGSTTSSGNTADEAKYAVEFGAGIAYVKGYRVSRLAPSFVDLEKPRATKDAQNVVIPFEMGNFSNVQNVFGFPNITGSTLSNAYQTIELRDTFSASQGSAAGNLIGFARVTSLQHLSDPDTTFGNADDRYKMNIMDVQMFGVLELTSAQTVSAGSLVVGASSGARAYLVNAISNSVRFDVYQIEGNFIENEMLTVDGENLDTIDSLHIYQYSDTRQVVARDETTSAIEFTADIVLEDAQIIEGSTFTYDATGGSEDITGLQSNFALDLRPGDEIYFNSTDFVVVDKIDPADVANTDIGNIFDYSNQVVNVTPGSSAPSAGTYTTLVRYRSKLFDIQNADLLSEMPKKYIKSIADESMVVRRTFDSQTVASNSVSITLPENEQFQSISNENYTITVLAGTNGTHPVGDQITIDTATPANLGYTSFTSADRTTIQIDNLTNITSVKVTATISKNVTIRKTKSGNQMFILKVNKTDKNLDKQNYNLVYSNLYGTRIQDKELSLGLTDCYRMHAVYESNDDNDPVIPSVTLVEPTFFATGSIVTGRTSKARAKVVDFASGSLKLSLVYLSGQFVAGETLDGFDSNDDALTAIINDSEGSVVAGSKVVTDNYFLEVNQTGFIYNISKLVRKKGVAAPIRKLKIVLDYYTHSATGDYFGGQSYLDTTYSDIPFFGFKFLADYLDFRPGVKNLYSGTGTVASPAFVNCSTFDFKSRVFNVSGTPNATVFDVPKLESNFRCDFNWYLPRVDKVFVTPEGEFQVIKGKSEEAPQPPDEIAEGMLLATISHKPYGFDPEKDTVITRSDNKRYTMRDIGALERRLDQVEYYTSLNILESNTYNTQILDSSGKNRLKNGFIVDDFSDHGKSDTAHEDFAASLDFQYGECQASHYTTNIPLVINTSLSTNYQQTGPLITLPYTEKKLIEQPYASRVENINPFNVFTYIGRVTLTPGSDDWLDTSRIPAQVTQIEGDFEQTSSELNVDQNGFAPIQWRAWETNWTGERVIGSSIQRNSHWLAQDRGRSPNPGVWGGRGMRRINRVTTIEATGTATREGIRTRVIPRIDRQSLGDSVVSSVSIPWIRSRNIEVDVARLKPRTRFYSFFDGKQTIDYQIPKMIELIKDPAIDNRTNSTPFSIGETVTGLTSGCKFKVAAPNDFYRFNPYDDTELPTSYASTTAYLNIDTTELAKQAVGDFYGNFQVQEVLEGTSGARAVIKDRRLISDRFGKLKTSFFIPSPGVDTNPRWATGTRTLRLSTDENDSRLAGAVASAAETNYEASGTLNTVQENVLAVRNAEIVRDTVTQDRTVRSTRTEIRQVGWYDPLAQSFIVDENGGAFITSVDVYFFKKDTNIPVSMQIRTMENGYPTTTILPFSDVSIEPDDVQLSETAAVATRFTFDAPVFIPQSVEHCFVLLSDSNSYQIWISRMGDQDITGDRTISEQPYAGVLFKSQNASTWTADQYEDLKFVVNRAEFSNTVNSALVLNNTVLARGNGGELNLRRDGIQTFTPELVLNLNSTTLPYTVGARIYQKTTNAEGTISKREVTVAGVLLTINDISGNWQQGSVNNNIVTNGIVSSKTTATITVTSASRTGATYSAGDTVTGATSGATAEVVSDDGGDTGTIVFRYVSKAFTAGETLEGDGTAGNVAFSAVTYAGDAVEAATISNAFPDATPTYASTQRKVKVFHSNHCMHSTANNVKIEGAVSEVADTSLTASISASDTSVSVSDAAAFHKTINGALISSNNVGYIKIGNEIMSYSAISNDNKTITINERGLDGTTAVSHADESVVECYNLDGIPLIEINKTHIGIQNPTLDSYELTTSSIARLGILGGGTNMYATQNVQYNLLVPQVERMLLPKTDITARINTISGTSINDGQTLSQASFSNDGVFNDVILGTDNYLDSPQLICSNINESNELSGAKSFRMDLTLSSLEANVSPVIDTDRLSATLVSSRINNPSDPNTAKLAVGDSHDAVYISRIADLTNPSGSIKVYFEGYRPPNSQIKVLYRVRPVGTATPIEELGFDFFPTEDAKIPATTERQLFREYEYEVSGLNFDQYQIKVVFVSPNQAYSPIIKDIRAIALAV

Physico‐chemical properties

protein length:	2403 AA
molecular weight:	263545,07860 Da
isoelectric point:	4,76950
aromaticity:	0,09280
hydropathy:	-0,26305

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032096	STR	DC_0487	12	68	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
DC_0414	STR	DC_0414	80	1295	Novel HMM	DC_0414	Central	Low	Positional only	88 proteins / 88 hits
IPR032096	STR	DC_0487	183	391	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
IPR032096	STR	DC_0487	1040	1286	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
DC_0082	RBD	DC_0082	1284	2403	Novel HMM	DC_0082	C-terminal	Low	Positional only	104 proteins / 104 hits

	Name	Taxonomy ID	Lineage
Phage	Synechococcus phage S-RIM2 R9_2006 [NCBI]	869663	Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host	No host information

Coding sequence (CDS)

Genbank protein accession

AGH06985.1 [NCBI]

Genbank nucleotide accession

HQ317291.1 [NCBI]

CDS location

range 82236 -> 89447
strand +

CDS

ATGGCACAAAACACAAACCTTAACGTCACACCTTATTACGACGACTTCGATAAGGACAAGAATTTTTATCGAGTGCTGTTCCGCCCTGGATTTCCTATTCAGGCAAGGGAACTTACTACGATGCAGAGTATTCTGCAGAATCAGGTAGAAAACGTCGGTTCTCACTTGTTCAAAGATGGCGCAATGGTCATCCCTGGTCAAGTTGGTTATGACCTGAACGTTGCTGCTATCATGCTTCAGGAGTCGTTCCTTGGTGCTGATGTTGAGGAATATAGAACTCAGTTGAATGGTAAGATTATTGAAGGTCTTACAACAGGTGTTAAGGCAAAAGTTCTTTATAGTATTTCTTCTACCGAGTCTGATAAAGGTTACATCACACTTTACGTTAAGTACATTGAATCTGGTGGTGTCAATGCTAATCAGGAGACTTTCCAGAACAACGAACAGTTGATTACCGACGTCGAGATTACGTTCGGTACAACTTTGATTGAGGTTGGTTCTCCCTTTGCTCAGTTACTTCCTACCGCTGCTCTACAAGTCGGTTCTGTTGCATATGTTCAGAGTGGTGTCTACTTCATTCGCGGTTTCTTTGTTGATGTAGATTATCAATACATCCTTCTCGACCAGTATGGAAGCAACCCCTCCTATCGTATCGGTCTCGATATTCAAGAGTCTATTGTCACACCAGAAGATGACCTTAGTCTCAACGATAACGCTGCTGGAACATCTAACTATGCTGCACCTGGTGCTCATAGATTTAGAATCACCACGAGACTGATCAAAAAACTTCTGACTGATGATGCTGATAAGAACTTCATCGAACTGCTTCGTATTAATGCTTCTAAGGTAGAGAAACTTGTTGATAGAAGTGCATATGAAGAACTTGAGAAGGGTCTTGCATTAAGAACATATGAAGAGTCTGGCAACTACGTTGTTAGAGATTTTGCAATCAAAGTTAGAGAAAATCTTGATGATGGTTTTAACAATGGTGTGTTTGCAAAAGGTTCGACTACATCCTCTGGCAATACTGCCGATGAAGCAAAGTATGCTGTAGAGTTTGGTGCTGGTATTGCATACGTCAAGGGTTATAGAGTTAGTAGACTTGCTCCTTCTTTTGTTGATCTTGAAAAACCTCGTGCTACAAAAGATGCACAGAACGTCGTTATCCCATTTGAAATGGGTAACTTCTCCAATGTCCAGAATGTTTTTGGATTCCCCAATATTACTGGTTCTACTCTGAGTAATGCATATCAGACAATCGAACTGCGTGACACTTTTTCTGCTTCTCAGGGTAGTGCCGCTGGTAACCTGATTGGTTTTGCTCGTGTCACATCACTGCAGCATCTGAGTGATCCAGATACGACCTTTGGTAACGCTGACGACAGATATAAGATGAACATCATGGATGTTCAGATGTTTGGTGTCTTGGAACTTACAAGTGCTCAAACTGTATCTGCAGGTTCTTTGGTTGTTGGTGCATCTTCTGGTGCAAGAGCATATCTTGTAAATGCTATCTCAAACTCTGTTAGATTTGATGTATATCAAATTGAAGGTAACTTCATTGAGAATGAAATGCTTACCGTTGATGGTGAGAATCTGGATACTATTGATTCTCTGCATATCTATCAGTATTCTGATACTCGTCAGGTTGTTGCTAGAGATGAGACAACTTCTGCAATCGAGTTCACTGCTGACATCGTTCTGGAAGACGCTCAGATCATTGAAGGTAGTACGTTTACATATGATGCAACAGGCGGTTCTGAAGATATTACAGGTCTTCAATCTAACTTCGCTTTGGATCTCAGACCTGGAGACGAGATCTATTTCAACAGTACCGATTTTGTTGTTGTAGATAAGATCGATCCTGCTGATGTTGCTAATACCGATATTGGCAATATCTTTGATTATTCTAACCAAGTTGTTAATGTAACTCCTGGTTCTTCTGCTCCTAGTGCAGGAACTTATACCACTCTTGTTCGTTACAGATCAAAACTGTTTGATATTCAGAATGCTGATCTCTTGAGTGAAATGCCCAAGAAGTATATCAAGAGCATTGCTGACGAATCAATGGTTGTCAGAAGAACATTTGATTCTCAGACTGTTGCATCAAACTCTGTTTCCATTACTCTGCCTGAGAATGAGCAGTTCCAGTCAATCTCTAACGAAAACTACACAATCACTGTTCTTGCTGGTACTAATGGTACTCACCCTGTCGGTGACCAAATCACTATTGATACTGCTACACCTGCTAATCTTGGTTATACTTCATTCACATCTGCTGATAGAACGACGATTCAGATTGATAACCTGACAAATATCACTTCTGTTAAAGTTACTGCAACTATTTCTAAGAACGTAACTATCAGAAAAACTAAGTCTGGCAACCAGATGTTTATTCTTAAGGTCAACAAGACCGATAAGAATCTTGATAAGCAGAACTATAACTTGGTATATTCCAATCTTTATGGTACAAGGATTCAAGACAAAGAACTGTCTCTGGGTCTGACTGATTGTTATCGTATGCACGCTGTGTATGAATCTAACGATGATAATGATCCTGTAATCCCTTCTGTGACTCTGGTTGAACCAACTTTCTTTGCTACAGGTAGCATCGTAACTGGTAGAACCTCAAAAGCAAGAGCAAAAGTTGTTGACTTTGCTTCTGGTTCCTTGAAACTGAGTTTGGTATATCTCAGTGGTCAGTTTGTTGCTGGTGAAACTCTCGACGGTTTCGATAGCAATGATGATGCACTCACTGCTATTATCAACGATAGTGAAGGTTCGGTTGTTGCAGGTTCTAAGGTTGTTACTGACAACTACTTCTTGGAAGTAAATCAGACAGGATTTATCTACAATATTTCTAAACTTGTTCGTAAGAAAGGTGTTGCTGCACCTATTAGAAAACTGAAAATTGTTCTTGACTACTACACTCACTCTGCAACAGGTGATTATTTTGGTGGTCAATCCTATCTGGACACTACTTATAGTGACATTCCTTTCTTTGGATTCAAGTTCCTTGCAGATTATCTCGATTTCCGTCCTGGTGTCAAGAACCTCTATAGTGGAACTGGTACTGTAGCATCTCCTGCATTCGTCAACTGTTCTACATTTGATTTTAAATCTAGAGTATTCAACGTATCTGGCACACCTAACGCAACAGTCTTTGATGTTCCTAAGTTGGAAAGCAACTTCCGTTGTGATTTCAACTGGTATCTGCCTAGAGTTGACAAAGTATTTGTTACTCCCGAGGGAGAGTTCCAAGTTATCAAAGGTAAGTCTGAGGAAGCACCTCAACCACCTGATGAAATCGCAGAAGGTATGCTTCTGGCAACCATCAGTCATAAACCATATGGTTTTGACCCAGAAAAGGATACGGTCATCACTCGCTCCGATAATAAGCGTTACACGATGCGTGACATTGGTGCGTTAGAGCGTCGTCTTGACCAAGTTGAGTATTATACCTCCTTGAATATCCTGGAGTCCAATACCTATAATACTCAGATTCTTGATTCTAGTGGTAAGAACAGACTGAAAAATGGTTTTATCGTTGATGATTTCTCCGATCACGGTAAGTCTGATACTGCACATGAAGACTTTGCAGCATCTCTTGATTTCCAATATGGTGAGTGTCAAGCATCTCACTATACAACTAACATTCCTCTTGTTATCAATACAAGTCTTTCTACTAACTATCAGCAAACAGGTCCTCTGATTACTCTTCCTTATACAGAGAAGAAACTGATTGAGCAACCTTATGCTTCTAGAGTTGAAAATATCAACCCCTTCAACGTCTTTACCTATATTGGTCGTGTAACACTGACTCCTGGTTCTGATGATTGGTTGGATACAAGTAGAATCCCTGCACAGGTCACACAGATTGAAGGTGACTTTGAGCAGACTTCTTCTGAACTTAATGTTGACCAGAATGGTTTTGCTCCTATTCAATGGAGAGCATGGGAAACTAACTGGACTGGTGAAAGAGTCATTGGTTCTAGTATCCAACGTAACTCTCACTGGTTAGCACAAGACCGTGGCAGATCTCCCAACCCTGGCGTCTGGGGTGGTCGTGGTATGCGTCGTATTAATAGAGTTACTACTATTGAAGCGACTGGAACTGCAACCAGAGAAGGCATTAGAACTCGTGTTATTCCCAGAATCGACCGTCAGTCTCTGGGCGATAGTGTTGTTTCTAGTGTTAGTATTCCTTGGATTCGTTCTAGAAATATTGAAGTTGATGTTGCACGTCTGAAGCCTAGAACTCGTTTCTACTCTTTCTTTGACGGTAAGCAGACCATTGATTATCAGATTCCTAAGATGATTGAACTCATCAAAGATCCTGCGATTGATAATAGAACAAACTCAACACCTTTCTCTATTGGTGAAACTGTAACAGGTTTGACTAGTGGATGTAAATTTAAAGTTGCTGCTCCTAATGACTTCTACAGATTCAACCCATATGATGATACAGAACTTCCTACATCGTATGCATCTACCACAGCATATCTGAATATTGATACTACTGAACTTGCTAAGCAGGCAGTCGGTGATTTCTATGGTAACTTCCAAGTACAGGAAGTTCTGGAAGGCACATCTGGTGCTCGTGCTGTTATTAAGGACCGTCGTCTTATCTCTGACCGCTTCGGTAAACTGAAGACTTCATTCTTCATTCCTTCTCCTGGAGTTGATACCAATCCCCGTTGGGCAACTGGTACAAGAACTCTGAGACTGTCTACCGATGAGAATGATTCACGTCTGGCAGGTGCAGTTGCATCCGCTGCTGAAACAAACTACGAAGCAAGTGGTACTCTGAATACTGTTCAGGAAAATGTCTTGGCAGTTCGTAATGCTGAAATCGTTCGCGATACTGTTACTCAAGATCGAACAGTTCGTTCTACTAGAACTGAGATTCGTCAGGTTGGTTGGTATGACCCTCTGGCACAATCCTTTATTGTTGATGAAAACGGTGGTGCATTTATCACCTCTGTCGATGTTTACTTCTTCAAGAAAGATACAAACATCCCCGTTTCCATGCAAATCAGAACCATGGAGAATGGTTATCCCACAACAACCATCCTTCCTTTCTCTGATGTAAGTATTGAACCTGATGATGTTCAGTTGTCTGAGACTGCTGCAGTTGCTACTAGATTTACATTTGATGCTCCTGTCTTCATTCCTCAGTCTGTTGAGCACTGCTTCGTTCTCCTCTCTGACTCCAACTCTTATCAGATTTGGATCTCTAGAATGGGTGACCAGGATATTACTGGTGACAGAACAATCTCTGAACAACCTTATGCTGGTGTTCTGTTTAAGTCACAAAACGCATCTACATGGACTGCTGACCAGTACGAAGACCTTAAGTTTGTTGTAAACAGAGCAGAATTTAGTAATACTGTTAACTCTGCATTGGTTTTGAACAACACTGTTCTTGCAAGAGGTAATGGTGGTGAACTAAACCTCCGTAGAGATGGTATTCAGACATTCACACCTGAACTGGTTTTGAACCTGAACTCCACAACTCTTCCCTATACCGTTGGCGCTCGTATCTATCAGAAGACTACTAACGCAGAAGGTACTATCTCTAAGAGAGAAGTAACTGTTGCTGGTGTTCTTCTGACAATCAACGATATTTCTGGTAACTGGCAGCAAGGTAGTGTGAATAATAATATCGTTACTAACGGTATTGTTTCTTCCAAGACTACTGCAACTATTACAGTCACTTCTGCTTCTAGAACTGGTGCTACCTATAGTGCAGGTGATACTGTTACTGGCGCTACATCTGGCGCAACTGCTGAAGTTGTAAGCGATGATGGTGGTGATACTGGTACAATCGTATTCCGTTATGTTTCTAAGGCATTTACTGCTGGTGAAACTCTGGAAGGAGATGGAACTGCTGGTAACGTCGCATTCTCTGCTGTTACCTATGCTGGTGACGCTGTTGAAGCTGCAACAATCAGCAATGCATTCCCTGATGCAACGCCTACCTATGCATCTACTCAGAGGAAGGTTAAGGTCTTCCACAGTAATCACTGTATGCATAGCACTGCCAACAACGTTAAGATTGAAGGTGCAGTCTCCGAAGTTGCAGATACCTCTCTGACGGCATCTATTTCTGCTTCAGATACATCTGTTTCTGTCAGTGATGCTGCAGCGTTCCACAAGACAATCAATGGTGCATTAATCTCTTCCAACAATGTTGGTTATATCAAGATTGGTAATGAGATTATGTCTTATTCTGCTATCAGTAATGATAATAAGACAATCACAATCAATGAAAGAGGTCTTGACGGTACAACTGCAGTATCTCACGCAGACGAGTCTGTTGTTGAGTGCTACAACCTTGACGGCATTCCTCTGATTGAGATTAACAAGACTCATATTGGAATCCAGAATCCAACTCTCGATTCTTATGAACTGACTACCTCTTCTATTGCTAGACTTGGTATCCTGGGTGGTGGCACTAACATGTATGCAACTCAAAATGTTCAGTACAACTTGCTTGTTCCTCAGGTTGAGAGAATGCTTCTTCCCAAGACCGATATTACGGCAAGAATTAATACCATCTCTGGTACATCTATCAATGATGGACAAACCTTATCTCAGGCATCGTTCTCGAATGATGGTGTATTTAATGATGTCATCCTCGGAACCGACAACTATCTTGACTCTCCTCAACTGATTTGTTCTAACATCAACGAGTCTAACGAACTCAGTGGTGCTAAGTCCTTCAGAATGGACTTGACCTTATCAAGTCTTGAAGCAAACGTTTCTCCTGTTATTGATACTGATAGACTGTCGGCAACTCTTGTTTCTAGTAGGATTAACAATCCTTCCGATCCCAATACTGCTAAACTTGCAGTTGGTGATTCTCACGATGCGGTATACATTAGTCGTATTGCAGATCTGACCAATCCTTCTGGTTCTATCAAGGTCTACTTTGAGGGATACCGTCCTCCTAATAGTCAGATTAAGGTCCTATATAGAGTACGTCCCGTTGGTACGGCAACACCTATTGAAGAACTCGGATTCGATTTCTTCCCAACCGAAGATGCTAAGATTCCTGCTACAACGGAAAGACAACTGTTCCGTGAGTATGAGTACGAAGTATCTGGTCTAAACTTTGACCAGTATCAAATCAAGGTTGTATTTGTTTCTCCCAACCAGGCGTACAGTCCAATCATCAAAGATATCAGAGCAATCGCCCTTGCTGTATAA

Genome Context

Title	Authors	Date	PMID	Source
The Genome Sequence of Synechococcus phage S-RIM2 isolate R9_2006	Henn,M.R., Marston,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B.	2021-02-24	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature