Protein

Experimentally validated
View in Explore
Genbank accession
ADO97303.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,52
Seq2Symm
C1 confidence 0,670
C1 0,670
C3 0,384
C2 0,004
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSNIVVNEIHGQDYYNYIIRGDAGMNLLVAGTQSVHPSGQAGFALPKGTTAQRPSSPSAGMIRYNTDNLAVEYYTGSQWRSSGGGTGGTSSNPFTSLAQADAAGVADGLYYFTNGSETKQVYVGNFSGTRFLMITSNNASSGTIPSGNNRRSTSYYVNRSGAGGSTLGTPSPDSDYIIGSWINSFNFSQIKVYGFGRGTTNGSTTWGGNRGTTVEATWNTNSFTSVTPRNQVSVIGELSGSAAYFVGDGIRRDNENGGFNANPNQTTVGGVGVINSSGDPANGCYLGHGSNEGNYEGWYNNSGNANSQGYTTWVR
Physico‐chemical
properties
protein length:315 AA
molecular weight: 33058,17720 Da
isoelectric point:6,28556
aromaticity:0,11111
hydropathy:-0,52349

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
ADO97303.1
1 315 aa
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,1577
Central domain 151 304 155 0,1210
C-terminal 305 315 10 0,9689
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Synechococcus phage S-SM1 [NCBI] · taxon 444859
Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Thetisvirus Thetisvirus ssm1
Host
Synechococcus sp. WH 6501 [NCBI] · taxon 166310
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. WH 6501

Coding sequence (CDS)

Genbank protein accession
ADO97303.1 [NCBI]
Genbank nucleotide accession
GU071094 [NCBI]
CDS location
range 30574 -> 31521
strand +
CDS
ATGAGTAATATCGTAGTAAACGAAATACACGGACAAGATTACTACAACTACATCATTAGAGGTGATGCAGGGATGAATCTACTTGTCGCAGGAACTCAAAGTGTTCATCCTAGTGGTCAGGCAGGTTTTGCTTTACCTAAAGGGACAACTGCACAACGTCCTAGTTCACCTAGTGCTGGGATGATTAGATATAATACCGATAATCTAGCAGTAGAATATTATACAGGATCACAATGGAGATCTAGTGGTGGTGGAACAGGTGGAACATCATCTAATCCATTTACAAGTCTGGCACAAGCAGATGCTGCTGGTGTCGCTGATGGATTATATTATTTCACTAATGGATCTGAAACAAAACAAGTTTACGTTGGTAACTTCTCAGGAACACGTTTCTTGATGATTACTTCTAACAATGCAAGTAGTGGAACAATTCCTAGCGGTAATAATAGAAGAAGCACAAGTTATTATGTAAACCGTTCTGGTGCTGGTGGTTCTACATTAGGAACTCCAAGTCCCGATAGTGATTATATTATTGGTAGTTGGATTAACAGTTTTAATTTCTCTCAAATCAAAGTATATGGTTTCGGTAGAGGAACAACTAATGGATCTACTACTTGGGGTGGTAACAGAGGAACAACTGTTGAAGCAACTTGGAATACTAATTCATTCACGAGTGTAACACCTAGAAATCAGGTTTCTGTTATTGGAGAACTTAGTGGTAGTGCTGCATATTTTGTTGGTGATGGTATTCGTAGAGATAATGAAAATGGTGGATTCAATGCTAACCCTAACCAAACAACTGTTGGTGGTGTTGGTGTAATAAACTCTAGTGGTGATCCAGCAAATGGTTGTTACTTAGGTCATGGTTCTAACGAGGGTAACTATGAAGGATGGTATAATAATAGCGGTAACGCAAACTCTCAAGGTTATACCACCTGGGTAAGATAA

Genome Context

Tertiary structure

ADO97303.1
ESMFold structure
Source ESMFold
pLDDT 53.3
Oligomeric state monomer
Download structure

Experimental validation

Experimentally validated

A wet-lab result is recorded for this protein, or for its sequence: a solved structure, an experimental GO annotation, a UniProt ECO:0000269 assertion, or a GenBank /experiment= qualifier.

Tier Source Assay Claim Reference
Experimentally validated GenBank
ADO97303.1
 experiment:proteomics:MS hypothetical protein – proteomics —
Validated by sequence identity GenBank
YP_004322938.1
 experiment:proteomics:MS hypothetical protein – proteomics —

Rows marked “Validated by sequence identity” come from a different entry carrying the same sequence — the experiment was not performed on this protein.

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 6501-1 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank