Protein

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Genbank accession
YP_009292252.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MQSYPYDWKGTNPQNAFTEHRVIDSELPEERVVVLDHRPFFGNTLEITPAGSTTPLTIGVDYQLAYMMPELDDSLASTVYCGVQILNPQIGGELIFKGQVLGESFYSPFVDILDYLVKYLNNPVDVDWLKLNGRPTLYAPQPAATSWADLVNKKYLASAVRDVELDADAANTAIAQKLTQLKATVAGLHSEIVAFNYPAHIATHKAHDITVAQSGAHPVSLKTPDTFLAYGKNLRTLTAEIRALGLQQSDINNYIEKWISKDVDGVFIQQLAANRSLFKSKGGVSEITFTDTAFILKSNGSVVLSAGYLESDTTMRFMEWMSGTNTLRIESSGNALGMDKLTLNGKVLLTTNTLLEYQSQGSGGGTTDPDDTKVYINGKGGLAFTGKGSKADPIKGTLTLPTASTAVKGVARLKATPGNESAGYAATPGSLAPYEGKANDYVPKTTMLNSKAMDDTTDRKVTKAEVGLGSVDNTADLAKPISNEQQIELDALSAKDHKHDWSELPLPSATSQAKGIATYTATEGGLASQRGVAPNVLKMLSDRLDIVAAALVNVKTGTVVDFAALNSSNWNASSSTRVEVQDLEYFWQMEGERGDGEVSGGIDLQTTPMFQWFKPGNRLEDTWPAAVLSNGTGLVFTGISKTPQFPLKPEPISVTATEMGAIGVKSLLAKRRIRARSGKINLYIAAGGPITVYLDGTSVATGNSPLAVELSVDSSDITHCIGIRTDCTDTAKSAAMMYEIYDGAVPVARSRVGDPVQWLQEFVTEWKGIRHYLYMSMLTGSLYSRAEPVESQGMDLDHQLIGYIDVPAAGLASNTKYPFPKMFDFGPSKEIASHIADNTAHKPGKNDWRLSDNSNMALMGKMTLIPDCSIRGTTVTATNANGMLYATQNAAVANEVLLSFSASQGQTPAQWFTPRNPKADGHPTYEGGLLIDMRQRSVPASVADVDLVLIGALSGASAAYQRHAFMRVKFDGSKPKFGFATAIVPGNTGNAALPTFNLADAPCTVTTLQSVSKMDSTLALALDMPSLKNQYPRAAIRYRYDCETRMLRIWQAFTPGGSESMILTEYEITFDFDLAHYFGGYVGVMFTPNNVVNTFALLPSLYPPRVSQFNAENYQYVRSLFESYMDGRLPSGSLANSTFQEVTGPFFPNPLLTEFLTLPADGGVIGDAVAGILPTAFQRGRMYPGSLMASAGPGWRSNMSDPAGGRYLNPATVGYRIPDNISVSKIVFSYKATMGGSVWMNDDAATLQTFNANTTASNVVLTMTPAADFKNGERIVLVQFVPPVPGKLGELRAEYFFEVYDQSGAVVLTVGHGTFGTMYGAGRRYVIEKSAPYHMTTYVWEYLLTRMRLERDSDGTGVGQWA
Physico‐chemical
properties
protein length:1362 AA
molecular weight: 147331,02220 Da
isoelectric point:5,52267
aromaticity:0,09104
hydropathy:-0,15984

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009292252.1
1 1362
Domain Start End Length (AA) Confidence
N-terminal 1 595 595 0,9041
Central domain 596 865 271 0,8713
C-terminal 866 1362 496 0,4905
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-595
Central
596-865
C-terminal
866-1362

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_Caitlin
[NCBI] 		1883379 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009292252.1 [NCBI]
Genbank nucleotide accession
NC_031120 [NCBI]
CDS location
range 149400 -> 153488
strand -
CDS
ATGCAATCGTATCCTTACGACTGGAAGGGTACCAATCCACAAAACGCCTTTACGGAACACCGTGTGATTGACAGCGAATTGCCTGAGGAGCGCGTGGTGGTTTTAGACCATCGCCCGTTCTTTGGTAACACGCTGGAGATTACCCCGGCCGGTTCAACCACCCCGCTAACAATCGGGGTGGATTACCAGCTGGCGTACATGATGCCCGAGCTGGATGACAGTCTGGCATCAACGGTGTACTGTGGCGTGCAAATCCTCAATCCGCAGATTGGCGGGGAGCTGATCTTTAAAGGTCAGGTATTGGGTGAATCGTTCTACTCACCGTTTGTCGATATCCTCGACTATCTGGTGAAGTACCTGAACAACCCGGTGGATGTGGACTGGTTAAAACTCAACGGCCGTCCGACGCTGTACGCCCCACAACCGGCGGCGACGTCGTGGGCGGATTTGGTCAACAAAAAGTACCTGGCCTCGGCTGTACGTGACGTAGAGTTGGATGCGGATGCGGCAAACACCGCGATTGCTCAAAAACTCACGCAACTGAAAGCAACCGTTGCCGGTCTGCACTCGGAGATTGTGGCCTTTAACTATCCGGCACATATCGCGACGCATAAGGCGCACGATATCACCGTGGCCCAATCAGGGGCGCATCCGGTTAGCCTGAAGACTCCTGACACGTTTTTAGCCTACGGGAAGAACCTACGTACCCTGACGGCTGAAATCCGTGCCTTGGGGCTCCAGCAGAGCGATATCAACAACTATATCGAGAAGTGGATTAGCAAGGATGTGGACGGGGTCTTTATCCAGCAGTTAGCGGCCAACCGCTCGCTGTTCAAGTCCAAAGGCGGGGTCTCGGAGATTACGTTCACCGATACCGCGTTTATCCTGAAATCCAATGGCTCGGTGGTGTTGTCTGCGGGCTATCTGGAGTCGGACACCACCATGCGGTTTATGGAGTGGATGTCCGGTACCAACACTCTGCGTATCGAGTCATCCGGCAATGCGCTCGGGATGGATAAGCTGACCCTCAACGGTAAAGTGCTGCTGACCACCAACACCCTGCTGGAATACCAGAGTCAGGGAAGCGGCGGAGGTACCACCGATCCCGATGACACCAAGGTGTACATCAATGGGAAAGGTGGCTTGGCCTTTACCGGTAAAGGTTCAAAGGCTGATCCGATTAAAGGCACCCTGACGTTGCCAACGGCATCGACCGCTGTCAAAGGGGTAGCGCGGTTGAAAGCAACGCCGGGTAATGAATCCGCGGGCTATGCCGCAACGCCGGGTTCACTGGCCCCGTACGAAGGTAAAGCGAACGACTACGTGCCGAAGACCACGATGCTGAACTCAAAGGCGATGGATGACACCACCGACCGGAAAGTGACCAAGGCAGAAGTGGGGTTGGGTAGCGTTGATAACACTGCTGACCTCGCGAAGCCAATTTCCAACGAACAGCAGATTGAGCTGGATGCACTGAGCGCCAAAGACCACAAGCACGACTGGTCTGAGTTGCCGCTGCCGAGTGCTACATCACAGGCCAAAGGGATTGCTACCTACACAGCAACCGAAGGCGGTCTCGCCTCTCAGCGTGGGGTTGCGCCAAACGTCCTGAAGATGCTGTCTGATCGCCTGGACATTGTTGCGGCGGCGTTGGTCAACGTCAAGACCGGAACCGTGGTGGACTTTGCTGCCCTGAACAGCAGCAACTGGAATGCCAGCAGCAGTACCCGGGTGGAAGTACAAGACCTGGAATACTTCTGGCAGATGGAAGGTGAGCGCGGTGACGGGGAAGTCAGCGGGGGGATTGATTTGCAGACCACCCCGATGTTCCAGTGGTTCAAACCAGGGAACCGTCTCGAAGACACTTGGCCTGCGGCAGTGCTGTCGAACGGCACAGGACTGGTCTTTACCGGGATTTCCAAAACACCGCAGTTCCCACTCAAGCCAGAACCGATTAGCGTGACGGCTACTGAGATGGGGGCGATCGGCGTGAAGTCGCTATTAGCGAAACGTCGTATCCGTGCCCGCTCGGGTAAGATTAACCTGTACATTGCGGCCGGTGGCCCGATTACAGTGTATCTGGATGGTACCTCTGTCGCTACCGGTAACAGTCCGTTGGCTGTTGAGCTGTCGGTAGACAGTAGCGATATCACGCACTGCATTGGCATCCGTACTGACTGTACGGACACGGCCAAGTCGGCGGCGATGATGTACGAAATCTACGACGGTGCGGTACCGGTTGCCCGTTCGCGTGTGGGCGACCCGGTGCAGTGGCTGCAAGAGTTCGTTACCGAGTGGAAAGGCATTCGACATTATCTGTACATGAGCATGTTAACAGGTTCGTTGTACAGTCGTGCCGAGCCGGTGGAAAGTCAGGGTATGGACTTAGACCATCAGCTGATTGGCTATATCGATGTCCCGGCGGCGGGATTGGCGTCTAACACCAAATACCCGTTCCCGAAAATGTTTGACTTTGGACCGTCGAAAGAAATTGCCAGCCACATCGCAGACAACACGGCCCACAAACCCGGGAAGAACGACTGGCGGTTATCCGATAACAGCAACATGGCACTGATGGGCAAAATGACCCTGATACCAGATTGCTCGATTCGGGGAACCACAGTGACCGCTACAAACGCCAACGGGATGCTCTACGCAACCCAGAACGCAGCCGTGGCCAACGAGGTGTTGTTGAGCTTCTCAGCAAGTCAGGGTCAGACGCCTGCGCAGTGGTTCACCCCGCGCAACCCGAAAGCGGATGGTCACCCGACGTACGAAGGGGGGCTTCTGATTGACATGCGCCAGCGTTCTGTTCCGGCATCCGTCGCGGACGTAGACCTGGTGTTAATCGGTGCGCTCAGTGGGGCGAGTGCTGCTTATCAGCGTCATGCGTTTATGCGTGTGAAATTCGATGGCAGTAAACCGAAGTTCGGTTTTGCCACCGCGATTGTTCCGGGGAATACCGGCAACGCTGCTTTACCGACCTTCAACCTTGCTGATGCGCCTTGTACGGTCACTACCCTTCAGTCTGTGTCGAAGATGGACAGCACTTTAGCGTTGGCGCTCGATATGCCTTCTTTGAAGAACCAATATCCGCGTGCCGCGATTCGTTATCGCTACGATTGTGAAACGCGTATGTTGCGTATCTGGCAAGCCTTTACGCCGGGTGGGTCCGAATCAATGATACTGACGGAGTACGAAATCACTTTCGACTTCGATCTGGCACATTACTTCGGAGGTTATGTTGGGGTGATGTTCACGCCAAACAACGTGGTCAACACCTTTGCGCTCCTACCTTCACTGTACCCGCCACGGGTATCGCAGTTCAATGCGGAGAACTACCAATACGTCCGCAGTCTGTTCGAATCGTACATGGACGGGAGACTGCCGTCGGGGTCGTTAGCCAACAGCACCTTCCAGGAAGTGACCGGTCCGTTCTTCCCGAATCCACTGCTAACGGAGTTTTTGACGTTACCTGCGGACGGGGGTGTAATCGGCGACGCGGTTGCTGGGATCTTACCAACTGCATTCCAGCGCGGACGGATGTACCCTGGGTCTCTGATGGCGAGTGCTGGACCAGGTTGGCGGAGCAACATGTCCGACCCTGCCGGTGGGCGTTATCTTAACCCGGCGACCGTCGGTTATCGCATCCCTGATAACATCTCGGTCAGTAAAATCGTGTTCAGCTACAAGGCCACGATGGGCGGCAGTGTCTGGATGAACGACGATGCGGCAACGCTACAAACGTTTAATGCCAATACCACGGCATCGAATGTGGTGTTGACGATGACTCCTGCTGCGGACTTCAAGAACGGTGAACGTATTGTTTTAGTACAGTTCGTGCCACCGGTTCCTGGGAAGCTCGGTGAGTTACGTGCCGAGTATTTCTTTGAGGTCTATGACCAATCGGGCGCGGTGGTGCTGACCGTAGGTCACGGTACATTCGGAACGATGTATGGTGCCGGTCGTCGGTACGTTATTGAAAAGTCTGCACCCTATCACATGACTACCTATGTTTGGGAGTACCTCCTTACCAGGATGCGTCTCGAGCGGGACAGTGATGGGACAGGCGTTGGACAATGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
290bb4e556257031f7f332596db2ef19cf8e37930e4cdf9a0e8e1f8801373e35
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6880
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50