Protein

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Genbank accession
ABR24588.1 [GenBank]
Protein name
gp38 distal long tail fiber adhesin
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISSGWVGSSAVSETGQRWMSAAMQAVRLGRPAYMSAMVGRSKEIHYSIGASNSYNKDTLINWMKAQGSTPVVITITGNIVSHSTGVPCLDFPSSLTNEYVTLIINSGVTVYGRGGNGGSNAAGAAGGNAINNAIGTRLRITNNGAIVGGGGGGGGGNRGILVFGGGGGRPFGAGGSSSNMGSGATAGSISAPGKGSVGSGSLSAYTGGAGGNVGAAGGRCNTQGNGTEYNGGAAGKAVTGNAPRWDKVGTIYGARV
Physico‐chemical
properties
protein length:258 AA
molecular weight: 25029,46210 Da
isoelectric point:10,12291
aromaticity:0,05814
hydropathy:-0,07326

Domains

Domains [InterPro]
IPR048291
1–40
IPR048291 IPR007932
ABR24588.1
1 258
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Phi1
[NCBI] 		448384 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABR24588.1 [NCBI]
Genbank nucleotide accession
EF437941 [NCBI]
CDS location
range 44989 -> 45765
strand -
CDS
ATGGCAATATCTTCTGGATGGGTAGGATCATCTGCGGTGTCCGAGACTGGTCAACGGTGGATGAGCGCCGCAATGCAAGCTGTACGCTTAGGTCGTCCGGCGTATATGTCGGCAATGGTCGGACGCTCTAAAGAGATTCATTATAGCATTGGTGCTAGTAACTCTTACAATAAAGACACTCTTATTAACTGGATGAAAGCACAAGGATCTACTCCGGTAGTAATTACTATCACTGGTAATATTGTTTCTCATTCTACTGGCGTTCCTTGTCTTGACTTCCCTAGCTCGTTAACAAACGAATATGTAACATTGATCATTAACTCCGGTGTGACTGTCTACGGACGTGGGGGTAATGGTGGTAGTAACGCTGCTGGCGCTGCTGGTGGAAACGCAATCAATAACGCTATCGGTACACGTCTACGAATTACAAATAACGGTGCTATCGTTGGCGGCGGTGGCGGTGGTGGTGGCGGTAACAGGGGTATACTAGTATTTGGTGGTGGCGGTGGTCGCCCATTCGGTGCTGGTGGGTCTTCCTCTAATATGGGTTCTGGTGCAACCGCTGGCTCCATTTCCGCTCCAGGTAAAGGATCTGTTGGTTCGGGGTCTCTTAGTGCATATACAGGCGGTGCTGGAGGTAACGTTGGTGCTGCTGGAGGAAGATGTAATACTCAGGGTAACGGTACAGAATATAACGGTGGTGCTGCTGGTAAAGCCGTTACTGGTAATGCCCCTCGTTGGGATAAAGTAGGCACGATCTACGGTGCTCGCGTGTAA

Tertiary structure

PDB ID
f8153a2cbe1725c6123d006ea0515b405a6c48cd54845456bfccfeadf0e6a598
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8913
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobile regulatory cassettes mediate modular shuffling in t4-type phage genomes Arbiol,C., Comeau,A.M., Kutateladze,M., Adamia,R. and Krisch,H.M. 2010 20333230 GenBank