Protein

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Genbank accession
UGL62966.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MAKAGGTYPDILQGVSQKPAHRRRPGQTHEQINVLSDPVNGLVRRRGTRFAASQAVVTSAELRNMDVFDFMQEGKEYALLYRRDASASSSATFAFLYNKTDEQFIPLVYENSTWVNTLVSGGASSLAAIGSYVYIAGNTTIPSATSTNVWQEQTNIQRLAAWVRTGKYNTTYTVNLTRTDNTVLTVTFKTVTASYPGTLDTSDIPFYLPGGTEPDPAYQKYVNDRVNEYNSAVNEWIVTSAEQTRPEYIAEKLSDLLVDAGVAATYIKGGIIIDDDQFKDITVDDEGDGTTFYAAGQEITDATYAVKFHWHGKVIRVRPSGAGADESYYLRAELENGETSGYGSVDWYEAPGVECTIDNLVSQLYIYNGVGYIARNGAGLTSLAPGSGEHPAYGARVAGDGLTSPIPWFIDKPITMLSVFQDRLVIGAQNYVNASRSADYLNFWRGSAVTIEDSDPIEIFAHGSEGDVLRHATLYNGNLVIFGDRQQYGISGDSVFSPKNPLIKAFSANKDSVDAKAQTSGNYIFYAQYGSEGTSLHQMRVGALNGQQTVTDEMSNELDSWLSGTPLQITPLTAPNLVLFRTREHPQDFYLYRYEDNKNNGQRIVDAWSKFQYHPALGEIIGVSSYKKNGLVFTARGSLVACDVFDPKGEPDSHACLDSWASFGTPTGVQTASASIAVNSTSPYFLLGCPYAQASDFLSQFDDLDAGALEYGVVSEALVIPTNPFPRDQNGQAVLDGRMSLNKVTVDVENTAGMLAAITTRNSNVTTTDFEGRILGDSDNLIARQPVYRGQLNISVGREVRECTYEIRSKDWLPLRVTGLSWTGQTFNNVRRVS
Physico‐chemical
properties
protein length:834 AA
molecular weight: 91350,25200 Da
isoelectric point:4,90642
aromaticity:0,10432
hydropathy:-0,31355

Domains

Domains [InterPro]
IPR058003
TTP
1–632
IPR058003 IPR058003
DC_0058
STR
1–834
DC_0058
UGL62966.1
1 834
Architecture
STR
STR 1-834
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL62966.1
1 834
Domain Start End Length (AA) Confidence
N-terminal 1 187 187 0,8730
Central domain 188 389 203 0,3205
C-terminal 390 834 444 0,2969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-187
Central
188-389
C-terminal
390-834

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage R3-22-T1
[NCBI] 		2886035 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas sp.
[NCBI] 		29446 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL62966.1 [NCBI]
Genbank nucleotide accession
OK275495 [NCBI]
CDS location
range 18038 -> 20542
strand -
CDS
ATGGCGAAGGCGGGAGGTACATACCCCGACATCCTACAGGGTGTCAGTCAGAAACCGGCGCATCGTCGGCGGCCGGGCCAGACGCACGAGCAGATCAACGTGCTGTCCGATCCGGTGAACGGCCTCGTGCGCCGTCGTGGTACGCGTTTCGCTGCTTCCCAAGCCGTTGTCACGTCGGCCGAGCTGCGCAACATGGACGTGTTCGACTTCATGCAGGAGGGCAAGGAGTACGCGCTGCTGTATCGGCGCGACGCAAGCGCTTCCTCGTCGGCCACATTCGCATTCCTCTACAACAAGACGGACGAGCAGTTCATCCCGCTCGTGTACGAGAATAGCACGTGGGTCAACACGCTGGTCAGCGGCGGCGCATCGTCGCTCGCGGCCATCGGCAGCTACGTCTACATCGCAGGCAACACCACGATCCCCTCGGCCACCAGCACGAACGTGTGGCAGGAGCAGACGAACATCCAGCGCCTCGCAGCGTGGGTACGGACCGGCAAGTACAACACCACGTACACGGTGAACCTGACGCGCACGGACAACACGGTGCTGACGGTGACGTTCAAGACGGTGACCGCATCGTACCCCGGAACTCTCGACACCAGCGACATCCCGTTCTACCTCCCCGGTGGCACGGAGCCGGACCCGGCGTACCAGAAGTACGTCAACGACCGAGTGAACGAGTACAACTCCGCAGTCAACGAGTGGATCGTGACGAGTGCAGAGCAGACGCGCCCGGAGTACATCGCCGAGAAGCTGTCGGATTTGCTGGTCGATGCAGGCGTGGCGGCGACGTACATCAAGGGCGGCATCATTATTGACGACGACCAATTCAAGGACATCACGGTTGACGACGAGGGTGACGGCACGACCTTCTACGCCGCAGGGCAGGAGATTACCGATGCGACCTACGCCGTCAAGTTCCACTGGCACGGCAAGGTCATCCGCGTGCGCCCGAGCGGTGCAGGCGCGGATGAGTCGTACTACCTGCGTGCTGAGTTGGAGAACGGCGAGACTTCCGGCTACGGGTCGGTAGACTGGTACGAAGCGCCAGGCGTGGAGTGCACCATCGACAACCTCGTGTCGCAGCTCTACATCTACAACGGTGTGGGCTACATCGCGCGCAACGGTGCGGGCCTCACGTCTCTGGCTCCGGGCAGCGGCGAGCATCCAGCCTACGGTGCGCGCGTGGCAGGCGACGGGCTGACCTCGCCTATCCCGTGGTTCATCGACAAGCCGATCACCATGCTGTCCGTCTTCCAAGACCGGCTGGTCATCGGCGCGCAGAACTACGTCAACGCCTCCCGCTCGGCGGACTACCTGAACTTCTGGCGCGGCTCGGCCGTCACCATCGAAGACAGCGACCCAATCGAAATCTTCGCGCACGGCAGCGAGGGCGATGTGCTCCGGCACGCGACGCTCTACAACGGCAACCTCGTGATCTTCGGTGACCGTCAGCAGTACGGCATCAGCGGCGACTCGGTGTTCAGTCCGAAGAACCCGCTGATTAAGGCGTTCAGTGCCAACAAGGATTCGGTGGACGCGAAGGCGCAGACCTCGGGCAACTACATCTTCTATGCGCAGTATGGCAGCGAAGGCACGAGCCTGCACCAGATGCGCGTGGGCGCACTCAACGGGCAGCAGACTGTGACGGACGAAATGTCCAACGAGCTGGACTCGTGGCTGTCGGGCACCCCGTTGCAGATCACACCGCTCACTGCACCGAACCTCGTCCTGTTCCGCACGCGTGAGCACCCGCAGGACTTCTACCTGTACCGGTACGAGGACAACAAGAACAACGGGCAGCGGATCGTGGATGCGTGGTCGAAGTTCCAGTACCACCCGGCGCTGGGCGAAATCATCGGCGTGAGCAGCTACAAGAAGAACGGCCTCGTGTTCACTGCACGCGGGTCGCTGGTGGCGTGCGACGTGTTCGACCCGAAGGGCGAGCCGGACTCGCATGCGTGCCTCGACAGCTGGGCGAGTTTTGGTACACCTACGGGCGTACAGACCGCGAGCGCAAGCATCGCCGTCAATAGCACTAGCCCGTACTTTCTGCTGGGTTGTCCCTACGCGCAGGCGTCTGACTTCCTTAGCCAGTTCGATGACCTCGATGCTGGTGCGCTGGAATACGGCGTGGTGTCCGAAGCTCTGGTGATCCCGACCAATCCGTTCCCTCGGGACCAGAACGGTCAGGCCGTACTCGACGGGCGCATGTCACTCAACAAGGTGACGGTGGACGTGGAGAACACGGCGGGCATGCTAGCTGCGATTACTACCCGCAACAGCAACGTCACCACCACGGACTTCGAGGGCCGCATCCTCGGCGACTCCGACAACCTGATCGCGCGGCAACCGGTGTATCGGGGACAGCTCAACATCAGCGTCGGCCGCGAAGTGCGAGAGTGCACCTACGAGATTCGCAGCAAGGATTGGCTCCCGCTCCGGGTGACCGGCCTGAGCTGGACGGGTCAGACCTTTAATAACGTGAGACGCGTATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d993fade2776c44cb11d055bcaa2bfeacd93cee66a936bae3d889a98bc0c32c0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2974
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50