Protein

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Genbank accession
AFA44876.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADKTLIGWTDATWNIITGCSMVSAGCTNCYAMGLAGSRLRHHPSRAGLTRETGGRSVWTGEVRFNEGWLDQPIRWRAPRRIFVCAHADLFHEAVPDEWIDQVFAVMGECRQHTFQVLTKRPERMREYLDERRKGRPLTPSISGGLLGYHPFNREVMPPKNIWLGTSIEDQATADARIPHLLQTPAAIRFVSAEPLLGQWDTRQTLDRAGMDPVWWGLKQVGLDLVIVGGESGPRARPMHPDWVRSLRDQCVSAGVAFHHKQWGEWLPINQMTEDAAEAMYEQIPDDDCPESTRRCLHDSLCLDTNGRTWSTGKAGQYHRMEDGAFSTSGSMSMFRVGKARAGRMLDGRIWDEMPGAADG
Physico‐chemical
properties
protein length:360 AA
molecular weight: 40499,47550 Da
isoelectric point:6,46370
aromaticity:0,08333
hydropathy:-0,49139

Domains

Domains [InterPro]
PS51257
1–27
PS51257
IPR011101
5–355
IPR011101
AFA44876.1
1 360
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacter phage RcapNL
[NCBI] 		1131316 Uroviricota > Caudoviricetes > Capnelvirus >
Host Rhodobacter capsulatus SB 1003
[NCBI] 		272942 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Rhodobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFA44876.1 [NCBI]
Genbank nucleotide accession
JQ066768.1 [NCBI]
CDS location
range 23844 -> 24926
strand -
CDS
ATGGCTGACAAAACCCTGATCGGCTGGACCGACGCCACCTGGAACATCATCACCGGCTGCAGCATGGTCAGCGCGGGCTGCACCAACTGTTACGCCATGGGGCTGGCCGGATCGCGCCTGCGCCATCACCCCAGCCGCGCCGGGCTGACCCGCGAAACTGGCGGGCGGTCTGTCTGGACAGGCGAGGTGCGGTTCAACGAGGGCTGGCTCGACCAGCCCATTCGCTGGCGCGCGCCGCGCCGGATCTTCGTCTGCGCACATGCAGACCTGTTCCATGAGGCGGTGCCAGATGAATGGATCGACCAGGTGTTTGCGGTGATGGGAGAGTGCCGCCAGCACACCTTCCAGGTTCTGACCAAGCGACCGGAGCGGATGAGGGAATATCTCGACGAACGCCGCAAAGGGCGGCCGTTGACGCCGTCGATCAGCGGCGGTCTCTTGGGGTACCATCCTTTCAATCGTGAAGTGATGCCGCCGAAGAACATCTGGCTGGGCACCTCGATCGAGGATCAGGCCACCGCAGATGCGCGGATCCCGCACCTGTTGCAGACGCCTGCTGCGATCCGATTTGTCTCGGCGGAGCCGCTGTTGGGGCAGTGGGACACGCGCCAGACCCTTGATCGCGCGGGCATGGATCCTGTTTGGTGGGGCCTAAAGCAGGTTGGCCTCGACCTCGTGATCGTCGGCGGCGAGAGCGGCCCGCGCGCCCGGCCCATGCACCCGGATTGGGTCCGCAGCCTGCGCGACCAGTGCGTAAGCGCTGGCGTGGCGTTCCACCACAAACAGTGGGGTGAGTGGCTCCCGATCAATCAAATGACCGAGGATGCGGCAGAGGCAATGTATGAACAAATCCCTGACGACGACTGCCCGGAATCGACGCGCCGGTGCCTGCACGACAGCCTTTGCCTCGACACCAATGGACGCACCTGGTCCACCGGAAAAGCTGGGCAGTATCATCGGATGGAGGACGGCGCATTTTCCACGTCCGGTTCAATGAGCATGTTCCGCGTTGGAAAAGCTCGCGCTGGCCGCATGCTCGACGGGCGCATCTGGGACGAAATGCCGGGAGCAGCGGATGGGTAA

Tertiary structure

PDB ID
095037b35e0077b0ae526880686085f17107d540897196d22e0e9f3179bba7b5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8479
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50