Protein

View in Explore
Genbank accession
QYW08376.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDSGNIIDLSISAGGNISGNITQTGDYLQNGTYNLNGNQFVYAGKYIEFLPKTAGNGAWANQHKNKAPIFTDLSSTTSTSEYHPLIKQRYKDGTFSVGTLVNEGSFKIQYINESGDSKYWTFNRNGSFIVDNGNIEARAGNISASGNINSATGFVSAPQINTKTIVFDTKAFGQYDSQSLVQYVYPGTGETNGINYLRKVRAKSGGTIYHEIASAQTGKSDEISWWTGNTAVNKQMGLRNDGALVLRRSLAIGTITTDENINNYGSAGAMGECYIVIGDASTGLSYKKTGVYDLVASGLSLASITPDSFRSTRKGIFGRSEDQGATWIMPGTNAALLSVQTQADNNNAGDGQTHIGYNAGGKMSHYFRGKGKTNINTQEGVDVNPGILKLTTGGESISFNAATGSINSTLAFRLNKGIIIDGPDNQGFQFNAPTAADGTRSIYWNSGTLAGQNKNPVTVKVWGNSFNASGDRNRETVFEVADGQGYYFYAQRTNPASGQTVGPVNFKFNGTVETGHIVGLGNISASGTGSFGGNVTMSNGLFVQGGSSITGQVKIGGTADALRIWNAEYGAIFRRSEDKLYIIPTPQNAGETGGISNLRPFYITLSNGKVSMDHDVDIGGGRFKVETSGTTSGQRITVNTASDAIRINAPTQESSNFIQGRKADVPKWYLGIGDGGNVVRMHSYTYSHGIALNSDTVDIAKPLRIGSAQLGTDGNITGGSGNFANLNTTINNLKTDIVSSYPIGAPIPWPTDTPPEGYAIMEGQTFDAGLYPKLAAVYPSGTLPDMRGQTIKGKPSGRAVLSTEADGVKSHSHSASASNTDLGTKTTSSFDYGSKTTSSFDYGTKTSSTTGNHNHTVSGNTSSAGAHQHARSGPQMQGGIPTSIFYDGYNSAGPNGNAKITGTVSGATASSNMAKTSSDGAHTHSWSGTTSATGNHAHTVGIGAHTHTVGIGAHSHTVAIGSHGHTITVNATGNTENTVKNVAFNYIVRLA
Physico‐chemical
properties
protein length:1032 AA
molecular weight: 108461,12490 Da
isoelectric point:8,91703
aromaticity:0,08236
hydropathy:-0,40223

Domains

Domains [InterPro]
DC_0538
STR
1–1030
DC_0538
G3DSA:6.20.80.10
STR
683–742
G3DSA:6.20.80.10 SSF88874 SSF88874
IPR048388
ATT
685–759
IPR048388 IPR037053
IPR051934
Unmapped
731–1032
IPR051934
IPR011083
ATT
785–832
IPR011083
QYW08376.1
1 1032
Architecture
STR
ATT
STR
ATT
STR
STR 1-684 | ATT 685-759 | STR 760-779 | ATT 780-833 | STR 834-1031 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage phiC600P9
[NCBI] 		2746891 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW08376.1 [NCBI]
Genbank nucleotide accession
MZ681930.1 [NCBI]
CDS location
range 151683 -> 154781
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATTCAGGAAATATCATTGATTTAAGTATTTCCGCTGGCGGTAATATCAGTGGAAATATCACTCAAACTGGTGATTATTTACAAAATGGAACATATAATCTTAATGGAAACCAGTTTGTTTATGCTGGTAAATATATTGAATTCCTGCCTAAAACCGCGGGTAATGGTGCTTGGGCAAACCAACATAAAAATAAAGCTCCTATCTTTACCGATTTGAGTTCAACTACTTCTACTTCAGAATACCATCCGCTAATTAAACAACGCTATAAAGATGGAACTTTTTCTGTTGGTACGTTAGTAAATGAAGGAAGTTTTAAAATTCAATATATCAATGAATCTGGTGATTCGAAATATTGGACTTTTAATCGAAACGGTAGTTTTATTGTAGATAATGGCAATATTGAAGCTCGTGCTGGTAATATTTCGGCTTCAGGTAATATTAACTCGGCAACTGGATTTGTTTCTGCTCCACAGATTAATACAAAAACCATAGTTTTTGATACAAAAGCATTCGGACAATACGATTCACAGTCATTAGTTCAATATGTTTATCCTGGAACCGGTGAAACAAACGGAATCAATTACCTTCGTAAAGTTCGAGCTAAATCAGGCGGAACCATTTACCATGAAATCGCTTCTGCGCAGACCGGAAAAAGTGATGAAATTTCTTGGTGGACTGGAAATACAGCCGTTAATAAACAAATGGGTCTTCGTAATGATGGGGCTTTAGTATTACGACGCTCACTCGCAATTGGTACAATTACAACAGATGAAAACATTAATAACTACGGCTCCGCTGGAGCAATGGGCGAATGTTATATAGTTATCGGTGATGCATCAACAGGTTTATCATACAAAAAAACTGGAGTATATGATTTAGTTGCTAGCGGTCTTTCTTTAGCATCTATTACTCCTGATAGTTTCCGTAGTACTCGTAAAGGTATATTTGGCCGCTCAGAAGATCAAGGCGCAACTTGGATAATGCCTGGTACAAATGCTGCTCTCTTGTCTGTTCAAACACAAGCTGATAATAACAATGCTGGAGACGGACAAACTCATATTGGATACAATGCTGGCGGTAAAATGAGTCATTATTTCCGCGGTAAAGGCAAAACTAATATTAATACTCAGGAAGGTGTAGACGTTAACCCTGGTATATTGAAGTTAACCACCGGCGGTGAAAGTATTAGCTTTAATGCCGCAACTGGAAGTATTAATTCTACATTAGCTTTTCGTCTTAATAAAGGCATAATTATTGATGGACCTGATAATCAGGGATTCCAGTTTAACGCCCCGACGGCTGCAGATGGTACTAGAAGTATATACTGGAATAGTGGTACTCTCGCAGGTCAAAACAAAAACCCTGTTACAGTTAAAGTGTGGGGTAATTCATTTAACGCATCTGGTGATCGTAATCGTGAAACCGTTTTTGAAGTAGCTGATGGGCAAGGTTATTATTTTTACGCTCAACGTACTAATCCTGCATCAGGTCAAACAGTAGGTCCGGTTAACTTTAAATTTAACGGAACTGTCGAAACAGGCCATATCGTAGGCCTTGGTAATATAAGTGCCTCCGGTACAGGTTCTTTTGGTGGTAATGTTACCATGTCTAATGGTTTGTTTGTCCAAGGTGGTTCTTCTATTACAGGCCAAGTAAAAATTGGTGGAACAGCTGATGCATTAAGAATTTGGAACGCTGAATACGGTGCAATTTTCCGTCGTTCTGAAGATAAGCTTTATATTATTCCAACTCCGCAGAATGCTGGTGAAACAGGTGGCATTTCTAATTTACGTCCGTTCTATATTACATTAAGTAATGGTAAAGTTTCTATGGATCATGACGTAGATATCGGCGGCGGTAGATTTAAAGTAGAAACTAGTGGAACAACATCAGGGCAACGTATTACAGTTAATACTGCCTCCGATGCTATTAGAATAAATGCTCCAACACAAGAATCTTCTAACTTCATCCAAGGACGTAAAGCAGATGTTCCGAAATGGTATTTAGGTATTGGTGATGGCGGCAACGTCGTTCGTATGCACAGTTACACCTACTCCCATGGTATTGCATTAAACTCTGATACGGTTGATATAGCTAAACCTCTTAGAATAGGTTCAGCCCAATTAGGTACTGATGGTAATATTACTGGTGGTTCTGGTAATTTTGCTAACTTGAATACCACAATAAATAACCTTAAGACGGATATTGTCTCGAGTTACCCAATTGGTGCTCCGATTCCTTGGCCTACTGATACACCTCCTGAAGGTTATGCCATAATGGAAGGTCAAACATTTGATGCTGGCTTGTATCCTAAGTTAGCTGCAGTGTATCCTTCCGGCACTCTGCCTGATATGCGTGGTCAAACTATCAAGGGTAAACCATCTGGGCGTGCTGTATTAAGTACAGAAGCAGACGGTGTTAAGTCACATAGCCATAGTGCAAGTGCATCAAACACAGATTTGGGTACTAAGACCACTTCTAGTTTTGATTACGGTAGCAAAACGACTTCAAGCTTTGATTATGGTACTAAGACAAGTAGTACCACTGGCAACCATAACCATACAGTGAGTGGTAATACTAGTTCCGCTGGTGCTCACCAACACGCGCGTTCAGGCCCTCAGATGCAAGGCGGCATACCCACTAGCATATTCTATGATGGATACAATAGTGCGGGTCCAAACGGCAACGCTAAAATCACTGGAACCGTGAGCGGTGCTACTGCATCGTCGAATATGGCCAAAACTTCTTCAGACGGTGCCCACACCCATAGTTGGTCAGGAACTACTAGCGCTACTGGTAACCATGCTCATACTGTGGGTATTGGTGCTCATACACACACTGTAGGCATTGGTGCTCATTCTCATACTGTTGCAATTGGTTCCCATGGACATACAATAACTGTAAATGCCACAGGAAATACAGAAAACACAGTTAAAAACGTTGCTTTTAACTATATCGTTCGTTTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5ccde75cf593f3f59aa7816419aec481757fc376c58779865ff9f5333e989fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5333
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Effect of a newly isolated T4-like phage on packaging of plasmid-borne ARGs via generalized transduction Wang,M., Zhang,J. and Sun,Y. 2021-10-14 — GenBank