Protein

View in Explore
Genbank accession
XNZ85492.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MAGTTDPTFRFAQNVFDTDGTDKVYDISFDLGYLDSDYVVAMSGVEDPETKLLTDMTAHAVSFIDVPAGNRVKVSPVPVANRKLIIFRQTDISKLLVRFQDGKLQTGRNMDLSATQLIMAIQEILDGLRNNNLIVEKQVSTVVDLNKIITEIYKEVLELLAAGGIVSVAPRVWSGKYDPISDDQTDFEIPGADVKDAGFYDTYMNGIGLEPDKDYVVILPTDDDPRSLIRFTKPLVEGDEWFTVLRGYAKPYTGPAPITTLAFPVQTSQGTAVFIGKPQEFALIRCMSDNDTIATVKLIPTSGDNRLVSGSWINLAARGAGKVVLRADPGVTLAVPAGLKAEARARNSVITITCEDADTNVWLVSGDLAME
Physico‐chemical
properties
protein length:371 AA
molecular weight: 40402,53200 Da
isoelectric point:4,58608
aromaticity:0,07547
hydropathy:-0,01752

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85492.1
1 371
Domain Start End Length (AA) Confidence
N-terminal 1 257 257 0,9987
Central domain 258 360 104 0,0084
C-terminal 361 371 10 0,9938
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-257
Central
258-360
C-terminal
361-371

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SBP7phi1
[NCBI] 		3162017 Viruses > unclassified bacterial viruses >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85492.1 [NCBI]
Genbank nucleotide accession
PQ492162.1 [NCBI]
CDS location
range 14749 -> 15864
strand -
CDS
ATGGCCGGTACGACTGACCCGACCTTCCGGTTCGCCCAGAACGTGTTCGACACGGACGGGACCGATAAGGTTTACGACATCAGCTTCGATCTTGGCTATCTGGACAGCGACTACGTGGTCGCAATGTCCGGGGTTGAAGACCCGGAGACGAAGCTGCTAACGGACATGACCGCGCATGCTGTATCTTTCATCGATGTGCCTGCGGGCAATCGTGTTAAGGTCAGCCCTGTGCCGGTCGCTAACCGTAAGCTGATCATTTTCCGTCAGACTGACATTAGCAAGCTGCTGGTGCGGTTCCAAGACGGCAAGTTGCAGACCGGGCGTAACATGGACCTGTCCGCAACCCAGCTTATCATGGCAATTCAGGAGATTCTGGACGGCCTTCGCAACAACAACCTGATCGTGGAGAAGCAGGTAAGCACCGTGGTTGACCTGAACAAGATCATCACGGAGATTTACAAGGAAGTTCTCGAACTTCTGGCCGCTGGTGGCATCGTTTCGGTCGCACCTCGTGTGTGGTCCGGTAAGTACGACCCCATTTCGGACGACCAGACGGACTTCGAGATTCCCGGCGCTGACGTTAAGGACGCTGGGTTCTACGACACGTACATGAATGGCATCGGTCTTGAGCCGGACAAGGATTACGTGGTGATCCTTCCGACCGACGACGACCCGCGCTCGCTGATCCGCTTCACTAAGCCGCTGGTTGAGGGCGACGAGTGGTTCACCGTGCTGCGCGGGTACGCTAAGCCGTACACAGGCCCGGCCCCGATCACTACTCTGGCATTCCCGGTGCAGACTTCCCAAGGTACCGCCGTATTCATCGGCAAGCCGCAGGAATTCGCTCTGATCCGGTGCATGTCCGACAACGACACCATCGCAACGGTCAAGCTGATCCCGACTTCGGGCGACAACCGTCTGGTGTCAGGGTCGTGGATCAACCTTGCAGCGCGAGGCGCCGGTAAGGTGGTGCTGCGTGCTGATCCCGGCGTGACTCTGGCCGTACCTGCGGGCCTCAAGGCCGAGGCGCGTGCCCGGAACTCCGTCATCACCATCACTTGCGAGGACGCCGACACGAACGTGTGGCTTGTCTCGGGTGATCTGGCAATGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
847724cdff2ac4e890797238d4446d88e9c96d99a51a41664a652eb7b83ea710
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8328
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Monsibais,A., Tea,O., Ghatbale,P., Whiteson,K.L. and Pride,D. — — GenBank