Protein

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Genbank accession
ATE84473.1 [GenBank]
Protein name
neck passage structure
RBP type
TF
Evidence RBPdetect2
Probability 0,54
Seq2Symm
C3 confidence 0,980
C3 0,980
C1 0,155
I 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSLDNFRNRTILWDTVNKDFPQPIQIMQGDVNARTLLIKIVDNGTEIDLTGHSLKLTYQYTNSSNSGFVMIPPKDLAKGEFILVIPTEMTATGVIEANLILLNKDKEQVIVSKNLTFISDSSTVTSLTQEVNNKIDDFTKLLLENMPQVMRSELNDLHAQTDSNKSNIELKANLADMTSLQSAMTELKKEVEAFGISPENLVTIKSLLDAIASNASESEVVELINSVKVLTSNISLMSNGDYSPKANQTDLESLQHTVNDHSAVISAKANKTDLDNLQATVDKQGIAISAKAEQSELSITNKNVTTAQETAKQAESEAKNAMAKATEAQANSLPLTGIAVSAIKLATPRKLGVNLQSSSFQYFDGTADATNIGVTGVLPVANGGTSTNDGVINTIAYANSADGTDGFTTVYPNLNLLKNTRNLTATSTSSWWNTLFSSEQIYDSAIKSKTGVSAMTLSFDVFVPLNTKVGGAVSLQIKGQTYQAHGDVGTNDFSTIVGEIWYNIEQSDLGKTIRLSFPIQIDTKYQSFDSALADTDSITIRQIKDTSGLVYSKLKLEEGSTATPWMPSASEVTINDYPKYVGFSNIIKPNKKSSDYKWLPMGLVSIDSATGSLKPAVIGIDCAQAHPVGSVVTNTSSSSSGYSTGKWENIGSAVIGSTTIYYWKRTA
Physico‐chemical
properties
protein length:667 AA
molecular weight: 71891,88540 Da
isoelectric point:5,00401
aromaticity:0,06297
hydropathy:-0,20600

Taxonomy

Phage
Lactococcus phage LP1502a [NCBI] · taxon 2027277
Uroviricota Caudoviricetes Skunavirus Skunavirus LP1502a
Host
Lactococcus lactis subsp. lactis Il1403 [NCBI] · taxon 272623
Bacillota Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus lactis

Coding sequence (CDS)

Genbank protein accession
ATE84473.1 [NCBI]
Genbank nucleotide accession
MF775703 [NCBI]
CDS location
range 7619 -> 9622
strand +
CDS
ATGAGTTTAGATAATTTTAGAAATAGAACGATTTTGTGGGACACAGTCAACAAAGACTTTCCCCAGCCAATACAAATAATGCAAGGCGATGTCAATGCTAGAACGTTATTAATTAAAATAGTTGATAACGGAACTGAAATTGATTTAACTGGTCATTCATTAAAACTTACATATCAATACACTAATAGTAGTAATTCTGGTTTTGTTATGATCCCTCCTAAGGACTTAGCTAAGGGAGAATTTATTTTGGTAATTCCTACCGAAATGACAGCGACAGGAGTTATTGAAGCGAACTTAATACTTCTCAATAAAGACAAAGAGCAAGTTATTGTCAGTAAGAATCTTACATTTATATCAGACAGTTCTACAGTTACAAGTTTAACTCAAGAAGTAAATAATAAGATTGATGATTTTACAAAATTATTATTGGAAAATATGCCACAAGTTATGCGTAGTGAGTTGAATGACTTACATGCTCAAACTGATTCAAACAAGAGCAATATTGAGCTTAAAGCAAATTTAGCTGATATGACTAGCTTACAAAGTGCAATGACAGAGCTTAAAAAAGAAGTAGAAGCATTTGGTATTAGTCCTGAAAATTTAGTTACTATAAAATCGCTATTAGACGCAATCGCAAGTAACGCCAGTGAATCTGAAGTAGTTGAACTAATAAATTCAGTAAAGGTTTTAACAAGTAACATTTCTCTGATGAGTAACGGAGATTACTCTCCTAAAGCTAATCAAACAGATTTAGAAAGTTTACAGCATACTGTTAATGACCATTCGGCAGTCATTTCAGCAAAAGCCAATAAAACGGATTTAGACAACTTACAAGCTACCGTTGATAAACAAGGGATTGCAATTTCAGCAAAAGCTGAACAATCAGAGTTATCAATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCGCTTACTGGTATTGCTGTCAGTGCAATTAAACTGGCAACACCTAGAAAACTCGGAGTAAATCTTCAATCTTCATCATTTCAATACTTTGACGGGACTGCTGATGCAACTAATATTGGAGTTACGGGGGTTCTTCCTGTTGCAAATGGAGGTACTTCAACAAATGACGGAGTTATAAATACTATTGCCTATGCCAACAGCGCAGACGGAACGGACGGTTTCACGACTGTTTATCCGAATTTGAATTTGTTGAAAAATACGAGAAATTTAACAGCAACTTCAACTTCATCGTGGTGGAATACTTTATTTAGTTCTGAACAAATATACGACTCCGCAATTAAATCTAAAACTGGAGTTTCAGCAATGACCCTTAGTTTCGATGTTTTTGTACCATTGAATACTAAAGTTGGAGGTGCAGTTTCTTTACAAATTAAAGGTCAAACCTATCAAGCTCACGGAGATGTCGGGACTAATGATTTCAGCACAATTGTTGGTGAAATTTGGTATAATATTGAACAAAGCGATTTAGGTAAAACAATTCGTTTAAGTTTTCCGATACAAATAGATACTAAATATCAGTCTTTTGATAGTGCTTTAGCTGATACTGATAGCATTACCATTAGACAAATCAAAGACACGTCAGGACTTGTGTATTCTAAATTAAAACTTGAAGAAGGTTCAACCGCCACTCCTTGGATGCCCTCAGCTAGCGAAGTAACAATAAATGATTATCCAAAGTATGTAGGGTTTAGTAATATCATTAAACCTAATAAGAAAAGTTCTGATTACAAGTGGTTACCAATGGGGTTAGTATCAATTGATAGTGCTACTGGCTCACTCAAGCCTGCGGTTATAGGTATAGATTGCGCTCAAGCACACCCAGTTGGCTCAGTAGTCACAAATACTTCAAGTTCATCATCAGGATATTCCACAGGCAAATGGGAAAATATCGGTTCAGCAGTAATCGGTTCAACAACAATATATTATTGGAAACGTACTGCATAA

Genome Context

Tertiary structure

ATE84473.1
ESMFold2 structure
Source ESMFold2
pLDDT 69.9
Oligomeric state monomer
Download structure