Protein

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Genbank accession
YP_001110839.1 [GenBank]
Protein name
Hoc-like head decoration
RBP type
TF
Evidence RBPdetect2
Probability 0,51
Seq2Symm
C2 confidence 0,469
C2 0,469
C1 0,137
I 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MVDVIKRRIVGVSDDSPQDGQVEIDMENVMPLRFSTGLNDTTAVTAGQAITLTVALADGMGPKTVQWYKDNNAISGATGLTYTKANSAAADSGTYKVVAHDGYGNIISDSTVVTVS
Physico‐chemical
properties
protein length:116 AA
molecular weight: 12112,37180 Da
isoelectric point:4,48257
aromaticity:0,05172
hydropathy:-0,06034

Taxonomy

Phage
Salmonella phage SETP3 [NCBI] · taxon 424944
Uroviricota Caudoviricetes Sarkviridae Jerseyvirus Jerseyvirus SETP3
Host
Salmonella enteritidis [NCBI] · taxon 149539
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica

Coding sequence (CDS)

Genbank protein accession
YP_001110839.1 [NCBI]
Genbank nucleotide accession
NC_009232 [NCBI]
CDS location
range 8660 -> 9010
strand +
CDS
ATGGTTGATGTAATTAAACGTCGTATTGTTGGTGTATCTGATGATAGTCCGCAGGACGGGCAGGTTGAGATTGATATGGAAAACGTAATGCCGTTGCGTTTCTCTACCGGTCTCAATGACACTACCGCGGTAACAGCCGGGCAGGCTATCACCCTGACTGTAGCGCTTGCCGACGGAATGGGCCCTAAAACGGTTCAATGGTATAAGGATAATAACGCCATCTCCGGCGCAACCGGTTTGACTTATACGAAGGCCAACTCCGCCGCAGCGGATTCTGGCACCTATAAAGTCGTAGCACATGACGGGTACGGTAACATTATCTCAGATAGCACAGTAGTAACCGTAAGTTAA

Genome Context

Tertiary structure

YP_001110839.1
ESMFold2 structure
Source ESMFold2
pLDDT 76.4
Oligomeric state monomer
Download structure