Phage RBP Database

Genbank accession

YAF82252.1 [GenBank]

Protein name

long tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,79

TF

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C3 confidence 0,997

C3	0,997
C6	0,024
C1	0,012

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAGMVIHITDAGRAALVAGGNTGTAARRVVEIGLGVAPFAFDRGMKTLPNERKRVTTFGGENVAPDTLHVVIQDDANDQYSLYAFGLYLENGVLFAVYVQDAPILEKSPAAMMLLATDVVFATIDAAKLEFGPATFLNPPATTERKGVVELATQAEVDAGDDDTRAITPKTAKRRYAALSGATFDGRVRVVADVDDRAAQLDVSPKTAGVGKAGKARLFGTFGDATLPDLSPRLVATLRAGFDAGAWGREYVDVCLNDGTNNDAASDAKQKRVARFASGGRVLIGERADDGKTALQVRGGVDASEGVAARAIDAGGAGGQFRAVYDGYGAFIRNDGRSVYFLSTPKGAPDGGFNDYRPFSWSLSTGQVIVDGSGAGTVFGGAVDVARDLEVGRQASEGHIKLGPVDGYLYANPVSTGWWSPAGSSYQYIFADHTFRIDGRMAWHEGNLDPLDKSKGGTLAGDVSFAPGKRLVLAEGSPAAPSLTFANDGAPDTGLYHAADGEFGVTCNGRAVVRFSPALVTFEQPVTVSTPPAADRSTRAATTEWVRTVLSATTIGQIVFEPRTTVRPGFLKANGVLVNRADYPELWAYAQASGALVSDADWMKDRWGCFSTGDGATTFRLPELRGEFIRCWSDARGGVDATRQIGAFQGDQNHTHAHGAAASEAPDHVHTAWTDVQGWHGHHGWTNAVGDHQHVSPWGEHPQMYNPPWGTWGAANNRGAEGSDNDNVYGMTSPAGNHNHEFNTEGNGNHGHAVGIGGGGRHAHTIAVQPDGGDEARPRNVALLALIRAY

Physico‐chemical properties

protein length:	790 AA
molecular weight:	83387,35280 Da
isoelectric point:	5,64186
aromaticity:	0,08734
hydropathy:	-0,27937

Domain architecture

YAF82252.1

1 790 aa

ATT 295–359 · ATT 552–631 · STR 632–789 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048390
ATT

IPR048390 SSF88874

IPR037053
ATT

IPR037053

YAF82252.1

1790 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0662
STR

DC_0662 DC_1872

YAF82252.1

1790 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048390	ATT	DC_0836	295	359	InterPro cluster	Long-tail fiber proximal subunit, trimerization domain	C-terminal	Medium	Text match	656 proteins / 656 hits
SSF88874	STR	SSF88874	545	789	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	552	631	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits

Proteins with similar domain architecture

Phage

Burkholderia phage vB_CBP66 [NCBI] · taxon 3461027

Burkholderia phage vB_CBP66

Host

Burkholderia pseudomallei [NCBI] · taxon 28450

Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia pseudomallei

Genbank protein accession

YAF82252.1 [NCBI]

Genbank nucleotide accession

PX105058.1 [NCBI]

CDS location

range 27204 -> 29576
strand -

CDS

ATGGCAGGAATGGTCATCCACATTACCGACGCCGGCCGCGCGGCCTTGGTCGCCGGCGGCAACACCGGCACGGCCGCGCGCCGCGTCGTCGAAATCGGGCTCGGCGTCGCGCCGTTCGCGTTCGACCGCGGCATGAAGACGTTGCCGAACGAGCGCAAGCGCGTGACGACGTTCGGCGGCGAAAACGTCGCGCCGGACACGCTGCACGTCGTGATCCAGGACGACGCGAACGACCAGTATTCGCTGTACGCGTTCGGCCTGTATCTCGAGAACGGCGTGCTGTTCGCCGTGTACGTGCAGGACGCGCCGATTCTGGAAAAATCCCCCGCGGCGATGATGCTGCTCGCGACCGATGTCGTTTTCGCGACGATCGACGCAGCCAAGCTCGAGTTCGGGCCGGCGACGTTCCTGAATCCGCCGGCGACGACCGAGCGCAAGGGCGTGGTCGAGCTCGCCACGCAGGCCGAAGTGGACGCCGGCGACGACGACACGCGCGCGATCACGCCGAAGACGGCGAAGCGGCGCTACGCGGCGCTCTCGGGCGCGACGTTCGACGGGCGCGTGCGCGTCGTCGCCGATGTCGACGATCGCGCCGCGCAGCTCGACGTGTCGCCGAAGACGGCCGGCGTCGGCAAGGCCGGCAAGGCGCGCCTGTTCGGCACGTTCGGCGACGCGACGCTGCCCGATCTGAGCCCGCGCCTGGTCGCGACGCTGCGCGCGGGATTCGACGCCGGCGCGTGGGGGCGCGAGTACGTCGACGTTTGCCTGAACGACGGCACGAACAACGATGCGGCGAGCGACGCGAAGCAGAAGCGCGTCGCACGCTTCGCGTCGGGCGGCCGCGTGCTGATCGGCGAGCGCGCGGACGACGGCAAGACCGCGCTGCAGGTGCGCGGCGGCGTCGACGCATCGGAAGGCGTCGCCGCACGCGCGATCGACGCCGGCGGCGCCGGCGGGCAGTTCCGCGCCGTGTACGACGGCTACGGCGCGTTCATCCGCAACGACGGCCGGAGCGTCTATTTCCTGTCGACACCGAAGGGGGCCCCGGACGGCGGCTTCAATGACTATCGGCCGTTCTCGTGGTCGCTGTCGACAGGGCAGGTGATCGTCGACGGCAGCGGAGCGGGCACGGTCTTCGGCGGCGCCGTGGACGTCGCGCGCGACCTCGAAGTCGGTCGGCAGGCAAGCGAAGGGCATATCAAGCTCGGGCCGGTCGACGGCTACCTCTACGCGAACCCGGTCAGCACCGGTTGGTGGTCGCCGGCGGGATCGTCCTATCAGTACATCTTCGCCGATCACACGTTTCGCATTGACGGGCGGATGGCGTGGCACGAAGGCAATCTCGACCCGCTCGACAAGAGCAAGGGCGGCACGCTGGCCGGCGATGTGTCGTTCGCGCCGGGCAAGCGGCTCGTGCTCGCCGAAGGCAGCCCGGCCGCGCCGTCGCTCACATTCGCCAACGACGGCGCGCCGGATACCGGCCTCTATCACGCAGCCGACGGCGAGTTCGGCGTGACCTGCAACGGGCGCGCCGTCGTGCGGTTCTCGCCGGCGCTCGTGACCTTCGAGCAACCCGTGACCGTGTCGACGCCGCCGGCGGCGGATCGATCGACGCGCGCCGCGACGACGGAATGGGTGCGCACGGTTCTGTCGGCGACGACGATCGGCCAGATTGTCTTCGAGCCGCGCACGACCGTGCGGCCGGGCTTCCTCAAGGCGAACGGCGTGCTCGTGAACCGTGCCGACTATCCCGAGCTGTGGGCGTATGCGCAGGCGAGCGGCGCGCTCGTCTCCGATGCGGACTGGATGAAGGATCGGTGGGGCTGCTTCTCGACCGGCGACGGCGCGACGACGTTTCGCCTGCCCGAGCTGCGCGGCGAATTCATTCGTTGCTGGTCCGATGCGCGCGGCGGCGTCGATGCGACGCGCCAAATCGGCGCCTTCCAGGGCGACCAGAACCACACGCACGCACACGGCGCCGCGGCAAGCGAAGCGCCGGACCACGTCCACACCGCGTGGACCGACGTGCAGGGCTGGCACGGCCACCACGGTTGGACGAACGCTGTGGGCGACCACCAGCACGTCTCGCCGTGGGGCGAGCACCCGCAGATGTACAACCCGCCGTGGGGCACGTGGGGCGCCGCCAACAACCGCGGCGCGGAGGGCAGCGACAACGACAACGTGTACGGGATGACGAGCCCGGCCGGCAACCACAACCACGAATTCAACACCGAAGGCAACGGCAATCACGGGCACGCCGTCGGTATCGGCGGCGGTGGCCGGCACGCGCACACGATCGCCGTTCAACCCGACGGCGGCGACGAAGCGCGCCCGCGCAACGTCGCGCTGCTCGCGCTGATTCGCGCCTACTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)