Protein

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Genbank accession
QBO65327.1 [GenBank]
Protein name
PKD domain protein
RBP type
TF
Evidence RBPdetect2
Probability 0,78
Seq2Symm
C1 confidence 0,998
C1 0,998
C2 0,009
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAFTVNITPKTPTGVIGQTQQFTATPSGQAEGGTITYAWTVDDVPQDGAEATFSYVLKGPAGQKTIKVVAANTVPDAEAETAEATATITVKNKTQTTTLAITPNSPDAGVIGTAIEFTAALASQPSGANATYQWYVDDSPVGEATNATFNYTPAESGVKRIKCVAQVTATDYDALSVTSNEVSLTVNKKTQTTTLAVTPNSPSAGVIGTPVQFTAALASQPVGASATYQWYVDDSQVGGETNSTFSYTPTTSGVKRIKCVAQVTATDYDAKEVTSNEVSLTVNKKTMNPRVTLTPPSINVQQDASATFTANVTDAPEEAQIEYSWKKDSSPVEGSTNVYTVDTSSIGSQTIEVTATITATDYDSKTITAEGQVQVTDKVAPEPEGELPYVHPLPHRTSAYIWCGWWVMDEIQKMTEEGKDWKTEDPDSKYYLHRYTLQKMMKDYPEVDVQESRNGYIIHKTALETGIIYTYP
Physico‐chemical
properties
protein length:472 AA
molecular weight: 50696,46620 Da
isoelectric point:4,57158
aromaticity:0,08051
hydropathy:-0,38178

Taxonomy

Phage
Escherichia phage vB_EcoM_G53 [NCBI] · taxon 2502416
Uroviricota Caudoviricetes Pantevenvirales Straboviridae Mosigvirus Escherichia phage vB_EcoM_G53
Host
Escherichia coli [NCBI] · taxon 562
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli

Coding sequence (CDS)

Genbank protein accession
QBO65327.1 [NCBI]
Genbank nucleotide accession
MK327943 [NCBI]
CDS location
range 110992 -> 112410
strand -
CDS
ATGGCTTTTACAGTTAATATAACTCCTAAAACACCTACTGGAGTTATAGGACAGACCCAGCAGTTTACTGCCACACCTAGTGGTCAGGCTGAAGGTGGAACTATTACATATGCTTGGACTGTGGATGATGTTCCACAAGATGGAGCTGAAGCAACTTTTAGTTATGTACTAAAAGGACCTGCCGGTCAAAAGACTATTAAAGTAGTTGCAGCAAATACAGTTCCAGACGCTGAAGCTGAAACAGCAGAAGCTACTGCAACTATCACAGTTAAAAATAAAACTCAGACAACTACTCTGGCTATAACTCCTAATAGCCCTGACGCTGGAGTAATAGGAACAGCTATTGAATTTACCGCCGCTTTAGCTTCGCAGCCATCAGGCGCAAACGCTACTTATCAATGGTATGTAGACGATTCTCCTGTTGGCGAAGCAACTAACGCTACGTTCAATTACACTCCTGCCGAAAGCGGGGTAAAAAGAATTAAGTGTGTGGCTCAAGTAACCGCAACAGATTATGACGCACTAAGCGTTACTTCTAATGAAGTGTCACTGACTGTTAATAAAAAGACACAGACAACTACGTTGGCAGTAACTCCCAATAGTCCTTCAGCCGGAGTAATTGGAACCCCAGTTCAATTTACTGCTGCCTTAGCTTCTCAACCGGTTGGAGCGTCTGCTACGTATCAGTGGTATGTAGATGATTCACAGGTTGGTGGAGAAACTAACTCTACATTTAGCTATACTCCGACTACAAGTGGAGTAAAAAGAATTAAATGTGTAGCCCAAGTAACCGCGACAGATTATGATGCAAAGGAAGTTACTTCGAATGAAGTATCATTAACGGTTAATAAGAAGACAATGAATCCACGGGTTACATTGACTCCTCCTTCTATTAACGTTCAGCAAGATGCTTCGGCTACATTTACCGCTAATGTCACTGATGCTCCAGAAGAAGCGCAAATCGAGTATTCATGGAAGAAAGATTCTTCTCCTGTAGAAGGGTCAACTAATGTATATACCGTTGATACCTCATCTATTGGAAGTCAAACTATTGAAGTTACTGCAACTATTACTGCAACTGATTACGATAGCAAAACTATTACAGCAGAAGGTCAAGTTCAGGTAACTGATAAAGTTGCTCCGGAACCAGAAGGTGAATTACCTTATGTTCATCCTCTTCCACATCGTACTTCAGCTTACATCTGGTGCGGATGGTGGGTTATGGATGAAATCCAAAAAATGACTGAAGAAGGTAAAGATTGGAAAACTGAAGATCCAGATAGTAAATACTACCTGCATCGTTACACTCTTCAGAAGATGATGAAAGACTATCCGGAAGTTGATGTTCAAGAATCACGTAATGGATACATCATCCATAAAACTGCTTTGGAAACTGGTATCATCTATACATATCCATAA

Genome Context

Tertiary structure

QBO65327.1
ESMFold2 structure
Source ESMFold2
pLDDT 81.0
Oligomeric state monomer
Download structure