Protein

View in Explore
Genbank accession
AHY83161.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,93
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MALEFKQILAGNTASLSHKVLEAIAEGWQPFDRVLTGTGSNTIGMVVAKGTNADITDFMVLSATSRQKLIDRVNEITHEGWEVFGEPSSESNQFAVSLTKGFQGTSGRDGMAGPQGPQGPRGEVGPEGPQGPKGDDGTPGEKGERGAVGPQGTVGPQGIQGPQGIQGPAGLKGDKGDRGDTGPQGPQGLKGDTGEKGDPGEVGPAGLTFRGQWVPATDYTKDDTVVYGGSTYFAVSNIAADEEPGVSPLWVVLAAQGTKGDKGEKGDPGDTGPQGEKGDTGPQGPRGIQGQQGIQGLPGDQGPKGDQGLQGIAGPTGPQGPKGDTGPQGIQGQQGIRGLTGPAGPQGPQGGRGDDGPQGVKGDKGDKGDKGDAPYTLFNSSNVTTTYIEIPIPQVTNTVLRVRLSGANFEYSVLSKGGANRYVDFYTFIPSLTSSTGNIYTGTTTLTPTGSLFLGNSPVALGLRELTITLKEWGDRTLTTIKAIHHGRTGDNTRPLQITMFSNKY
Physico‐chemical
properties
protein length:505 AA
molecular weight: 51931,64410 Da
isoelectric point:5,11366
aromaticity:0,05743
hydropathy:-0,61743

Domains

Domains [InterPro]
IPR050149
100–371
IPR050149
IPR008160
146–204
IPR008160 IPR008160
AHY83161.1
1 505
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage e4/1c
[NCBI] 		1495286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli O157:H7
[NCBI] 		83334 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHY83161.1 [NCBI]
Genbank nucleotide accession
KJ668713 [NCBI]
CDS location
range 7065 -> 8582
strand +
CDS
ATGGCTTTAGAATTTAAGCAAATCCTTGCCGGTAACACAGCTTCACTTAGCCACAAGGTGCTAGAGGCAATTGCGGAAGGTTGGCAGCCGTTCGATAGAGTCTTGACCGGAACTGGATCTAACACTATTGGCATGGTTGTAGCTAAGGGAACTAACGCAGACATTACCGACTTCATGGTTCTGAGTGCAACCAGTCGCCAAAAGCTAATTGATAGAGTAAATGAAATCACTCACGAAGGTTGGGAGGTGTTTGGCGAACCTTCATCTGAGTCAAATCAGTTTGCAGTTTCTTTAACTAAGGGTTTTCAGGGTACATCTGGTAGGGATGGAATGGCAGGACCACAAGGCCCACAAGGTCCACGTGGCGAGGTTGGCCCTGAAGGTCCGCAGGGTCCAAAAGGCGACGATGGTACGCCTGGTGAAAAGGGTGAGCGTGGAGCGGTAGGGCCACAAGGCACGGTTGGGCCTCAAGGCATTCAGGGACCTCAAGGTATTCAAGGACCAGCCGGATTGAAGGGTGACAAAGGTGATAGGGGTGATACTGGCCCACAGGGACCGCAAGGCTTGAAGGGTGACACTGGAGAGAAAGGTGATCCTGGCGAAGTCGGGCCTGCTGGTTTAACATTCCGTGGGCAATGGGTTCCCGCCACTGATTATACAAAAGATGACACTGTAGTTTACGGTGGATCAACCTACTTCGCAGTTAGCAACATTGCAGCAGATGAGGAGCCTGGAGTATCACCTTTGTGGGTTGTTCTTGCCGCTCAGGGAACTAAGGGTGATAAGGGTGAAAAAGGTGATCCTGGCGATACTGGGCCTCAAGGCGAGAAAGGTGATACAGGACCGCAGGGGCCAAGAGGAATTCAGGGTCAGCAAGGCATTCAAGGCTTGCCTGGTGATCAAGGACCAAAAGGTGATCAAGGATTGCAAGGTATCGCCGGACCAACCGGACCACAAGGCCCTAAAGGTGATACCGGACCGCAGGGCATTCAAGGTCAGCAGGGTATTCGTGGGTTAACTGGCCCAGCCGGTCCACAAGGTCCTCAGGGTGGAAGGGGTGACGATGGCCCTCAGGGTGTAAAAGGTGATAAAGGTGATAAAGGTGATAAAGGTGATGCTCCTTACACATTATTTAACTCAAGTAACGTGACGACGACATATATTGAAATACCCATCCCACAAGTAACAAACACTGTCCTAAGGGTTAGGCTTTCTGGTGCCAACTTTGAATACAGCGTTTTGAGCAAAGGTGGAGCGAATAGATATGTTGACTTTTACACATTCATTCCGTCATTAACCAGTTCAACTGGTAACATCTATACAGGAACGACTACCCTGACGCCAACTGGTAGCCTTTTTTTGGGTAACTCTCCTGTAGCTCTTGGGTTGAGGGAATTGACAATAACACTCAAGGAGTGGGGTGATAGGACTCTAACCACAATAAAGGCTATACATCACGGAAGAACAGGTGATAACACAAGGCCTTTGCAGATAACTATGTTTAGTAATAAGTATTAA

Tertiary structure

PDB ID
3112dd627fc36bd0c4fb7870c72584e48b44d5ad8243362e1cd5c293c1127d80
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6482
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of e4/1c, an Escherichia coli O157:H7-specific phage with proven potential as a biocontrol agent McAuliffe,O., Coffey,B., Casey,A., O'Sullivan,O., Coffey,A. and Ross,P. 2014-12-24 — GenBank