Protein

View in Explore
Genbank accession
XDJ03097.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNPTLITTPFAENGDKNTIPESVGAEPQNATMQAGFPPITQQKISEGGIPPERNDFNGMFNLVTQHLVHLNNGMSYEFDQEHADKIGGYPLNARLMLDNGDIVKSTIANNTANPNLDMAGWLLANSASAILDKSGISQQEVNDLTAHLDTYLKKMNILPSEDISTVLNQVKSDGVKKLHVKSREYIVNSLIEFTDDFEFVNETGTVFNFGDTGGFYASGSHTQITTLASDIVKNQSQSFDVADASQIQKGDWLVIYCTDDFSYSPYRNYYRKGEFVEVASVSGNTVKFFGRAYDNYLTSENIVILKVNPINFKFNYLKTVSTDNNPNVPLVIDYARNFETGYFENKGGKFAGLRLRRCFNFNIAINSAKNNAPANTLNYGIQISNCQNYNYFGGSNNSTRHAVAIGGDGDLGCVPCRNGYVSGAILHSETDTSGADMHGNVERTVYDHCTTNYATFGAGDNEYSNCDIYEREGQGCVLIAKPRGGEFKLTNNTYYTKTPLNSWSLVHGIIEKQLHEDLTVKLDGGCINGVGGASAGIVTIRQSNALNEALTKKVNVHITGGVSCDFDALRHWAWVEDGTIGRYTVPIGYIIVDDVVNTKDTANPYLIYPSQSTLATNVKTRQMLQQGVVSVTSAVNNTATRANVINLKYKYSKAPNVIVSVGNLVGSASWDATFFNEDTNVEPLRTPTPVNSLVAIDQVRPAVLWNKKVVTPKTFNLYWESGIREI
Physico‐chemical
properties
protein length:727 AA
molecular weight: 79879,24890 Da
isoelectric point:5,47009
aromaticity:0,09629
hydropathy:-0,32146

Domains

Domains [InterPro]
DC_0704
ATT
1–264
DC_0704 IPR054136 IPR049350
IPR049350
STR
218–308
IPR049350
XDJ03097.1
1 727
Architecture
ATT
STR
ENZ
STR
ATT 1-264 | STR 265-308 | ENZ 347-602 | STR 625-721 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDJ03097.1
1 727
Domain Start End Length (AA) Confidence
N-terminal 1 165 165 0,9950
Central domain 166 604 440 0,9888
C-terminal 605 727 122 0,9612
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-165
Central
166-604
C-terminal
605-727

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM-SPB
[NCBI] 		3236747 Uroviricota > Caudoviricetes > Obolenskvirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ03097.1 [NCBI]
Genbank nucleotide accession
PP977194 [NCBI]
CDS location
range 28491 -> 30674
strand +
CDS
ATGACTAATCCAACACTCATTACAACCCCATTCGCTGAAAATGGCGATAAAAACACCATTCCAGAATCAGTTGGCGCTGAGCCGCAAAATGCAACAATGCAAGCTGGATTCCCGCCAATCACTCAACAAAAGATTTCTGAGGGCGGCATTCCTCCTGAACGAAATGACTTCAATGGAATGTTCAACCTAGTTACGCAACATTTAGTACATCTTAACAACGGCATGTCTTATGAGTTCGATCAAGAGCATGCAGATAAGATAGGCGGCTATCCATTAAATGCCCGCTTGATGCTTGATAATGGAGATATTGTTAAGTCTACCATTGCGAATAACACAGCCAATCCAAATTTAGATATGGCTGGATGGCTATTGGCAAACTCGGCTAGTGCTATTTTAGATAAGAGCGGGATAAGTCAACAAGAGGTTAATGACCTGACAGCGCACTTAGATACATATTTAAAAAAAATGAATATTCTTCCAAGTGAAGATATATCCACTGTATTGAATCAAGTCAAATCCGATGGTGTCAAAAAGTTACATGTTAAAAGTCGTGAATACATTGTTAATTCATTGATTGAGTTCACTGACGATTTCGAGTTCGTCAACGAGACCGGTACGGTATTTAATTTTGGAGACACAGGTGGCTTCTATGCTTCTGGTTCTCACACACAGATAACAACTTTAGCTAGCGACATTGTAAAAAATCAGAGCCAATCTTTTGATGTTGCAGATGCGTCTCAAATTCAAAAAGGAGATTGGTTAGTAATTTACTGTACAGACGACTTTAGTTATTCACCATATCGCAACTACTATAGAAAAGGTGAGTTTGTAGAGGTTGCATCAGTAAGTGGAAACACAGTTAAGTTTTTTGGCAGAGCATATGACAATTATCTAACCTCTGAAAATATCGTTATTCTAAAAGTTAATCCGATCAATTTTAAGTTTAACTATCTGAAAACAGTTTCTACTGATAACAATCCTAACGTTCCATTAGTGATTGATTACGCCCGTAATTTTGAAACAGGGTATTTTGAGAACAAGGGTGGTAAATTTGCTGGACTTAGATTGCGCAGATGTTTTAATTTCAATATTGCTATTAATTCAGCTAAAAATAATGCGCCAGCAAATACCCTGAACTATGGTATTCAAATATCTAACTGTCAAAATTATAACTATTTTGGTGGTAGCAACAATTCCACTCGTCACGCGGTCGCAATAGGTGGTGACGGTGACTTGGGTTGTGTTCCGTGTAGAAATGGGTACGTGTCAGGTGCAATATTGCATAGTGAGACAGATACTTCTGGTGCAGATATGCACGGAAATGTTGAGCGTACTGTATATGATCACTGCACAACAAACTATGCAACATTTGGCGCTGGTGATAATGAATACTCGAATTGCGATATTTATGAGCGTGAGGGTCAAGGGTGTGTACTTATTGCGAAGCCTAGAGGTGGTGAGTTTAAACTAACCAATAACACATATTACACTAAAACACCTTTAAACTCATGGTCGCTAGTTCACGGTATTATTGAAAAACAATTGCATGAAGATTTGACAGTAAAACTGGATGGAGGGTGTATTAACGGTGTTGGCGGTGCATCAGCTGGTATTGTAACAATAAGACAATCTAACGCTTTGAATGAAGCTCTCACAAAAAAAGTAAATGTACATATTACAGGCGGCGTGTCTTGTGATTTTGATGCACTTAGACACTGGGCTTGGGTTGAAGATGGAACTATCGGTAGATACACTGTTCCAATCGGCTACATAATCGTTGATGATGTAGTTAATACGAAAGACACCGCAAATCCGTATTTAATCTATCCGAGTCAATCAACACTGGCTACTAATGTTAAAACTAGACAAATGTTGCAACAAGGGGTTGTCTCAGTGACTTCTGCTGTCAATAACACAGCTACCCGAGCAAATGTTATAAACTTAAAGTACAAGTATTCTAAAGCTCCTAATGTGATTGTTAGTGTTGGAAACTTGGTTGGTTCTGCATCATGGGATGCTACATTTTTTAATGAAGATACTAATGTTGAGCCTCTTCGAACACCGACCCCCGTCAACTCTTTAGTTGCAATAGATCAGGTTAGGCCAGCGGTGCTTTGGAATAAAAAAGTTGTGACGCCAAAAACCTTTAATTTGTATTGGGAGTCTGGAATACGTGAGATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a116019f6e7f36089e42a842d62f390e28d835db62224f2fa5b9772fbed1e24c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8130
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization and preclinical evaluation of a locally isolated lytic Acinetobacter phage vB_AbaM-SPB against carbapenem-resistant Acinetobacter baumannii clinical isolate Elshamy,A.A., Saad,B.T., Mabrouk,S.S. and Aboshanab,K.M. 2025-11 — GenBank