Protein

View in Explore
Genbank accession
XSD93967.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLNNLNQPKGSTIGVLKDGRTIQEAFDQLDPVVSLSSTVSLATAVARLQITGGTIVVPAGTWEVPNLLNVPPSIQIIGRGNSSILKQPASSTSKGVLQFVLNNPTDSVRVDNLSIVTERPYQADNIAIRVDLRPQLSGDQIANRNVRRGSLTNLSIRGSTARTDGVSFGIGIDLVSTGWITLDNIHVVGSSSTATPYGFRGVGICQRGDGKPVETIIRGLMAVSLEYAYLCPEYTEGVYLTDSGAVNCKWGVVVSPVADYVIGKLGQVGGYQFVVDQFHPNVSQGGIFLSKCRYSFVSNVMAILDDHSVSSAVLTVHLRDSSYCNVNAVTAVSYNVNGTTGITRQVVVLNNTSDSFVGNISGLTEGTQYENLTNIVRLVNNSQRNEIEGVKGSNANEGISVGAGCGQNSIAKYRFSNVTTPVLDEAGDLNRGNTAAHYETVTPPPSSQEVTLEIVPRGYFSRRPQGFSYTITTPTDASFPIVVFYDRDSSTPTKVVLKVKSGVLGNNLPTVMIGISITLHD
Physico‐chemical
properties
protein length:521 AA
molecular weight: 55582,95940 Da
isoelectric point:6,33297
aromaticity:0,06526
hydropathy:-0,02111

Domains

Domains [InterPro]
DC_1231
ATT
1–156
DC_1231 DC_1674
IPR012334
STR
14–442
IPR012334
IPR011050
STR
40–420
IPR011050
XSD93967.1
1 521
Architecture
ATT
STR
RBD
ATT 1-156 | STR 157-442 | RBD 443-521
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSD93967.1
1 521
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,8015
Central domain 71 433 364 0,9905
C-terminal 434 521 87 0,9884
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-433
C-terminal
434-521

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpn_K74_evo4
[NCBI] 		3412944 Viruses > unclassified bacterial viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSD93967.1 [NCBI]
Genbank nucleotide accession
PQ569706.1 [NCBI]
CDS location
range 38090 -> 39655
strand +
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAAGAGGCATTCGACCAGCTGGACCCTGTGGTATCCCTTTCGAGTACTGTTAGCTTGGCCACTGCGGTTGCCCGCCTTCAGATTACTGGAGGCACCATCGTGGTTCCTGCGGGTACTTGGGAAGTGCCTAACCTGCTGAACGTCCCTCCGTCAATTCAAATCATCGGTAGAGGCAATAGCTCAATCCTGAAGCAGCCAGCAAGCTCCACCTCGAAGGGTGTCCTTCAGTTCGTTCTGAACAACCCTACCGATTCCGTGCGAGTGGATAACCTTAGTATCGTAACTGAGCGTCCCTATCAGGCAGATAACATCGCCATTCGGGTTGACCTTCGGCCTCAGCTGTCCGGTGACCAGATAGCGAACCGCAACGTCAGACGTGGGTCACTTACCAACCTGAGCATACGAGGGTCTACTGCCCGTACCGATGGGGTATCTTTCGGCATAGGTATCGACTTGGTGTCAACAGGTTGGATTACCTTGGACAACATTCACGTCGTAGGGTCAAGCTCTACAGCGACACCTTATGGGTTCCGTGGGGTCGGCATCTGCCAGCGTGGTGACGGGAAACCTGTGGAGACAATCATTCGCGGACTGATGGCGGTTAGCTTAGAGTATGCCTACCTTTGCCCTGAGTACACCGAGGGTGTCTACCTTACGGATTCTGGGGCGGTTAACTGTAAGTGGGGCGTTGTGGTGTCCCCGGTAGCTGACTACGTGATTGGTAAACTTGGGCAGGTTGGTGGTTATCAATTCGTCGTAGACCAATTCCACCCCAACGTTAGTCAGGGTGGAATCTTCCTGTCTAAGTGTAGATACTCATTTGTATCTAACGTCATGGCCATACTGGATGACCACTCGGTATCCTCAGCTGTTCTTACGGTGCACCTTCGTGACAGCTCCTACTGCAACGTCAATGCGGTAACGGCTGTCTCTTATAACGTTAATGGTACCACTGGGATTACCCGGCAGGTTGTTGTCCTCAATAACACTTCAGATTCCTTCGTAGGGAACATATCAGGGCTCACCGAAGGGACTCAGTACGAGAACTTGACGAACATCGTCCGTCTGGTTAATAACTCTCAGCGTAATGAGATTGAGGGTGTTAAGGGTTCCAACGCTAACGAGGGCATCTCTGTGGGTGCTGGCTGTGGGCAGAACTCTATCGCCAAGTACAGATTCAGCAACGTGACCACTCCAGTCTTGGACGAGGCGGGTGACCTGAATCGTGGTAACACTGCGGCCCACTACGAGACTGTAACCCCCCCACCGTCCTCTCAAGAGGTCACCTTGGAGATTGTACCTCGTGGGTACTTCAGTCGTCGCCCTCAAGGGTTCAGCTACACGATTACCACACCGACGGACGCCTCGTTCCCTATCGTCGTGTTCTATGACCGAGACTCTAGTACGCCAACCAAAGTGGTGCTTAAGGTTAAGTCGGGTGTATTGGGTAATAACCTTCCTACGGTTATGATTGGAATCTCTATCACGCTACACGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4bc0d31758eeb6fae62419bbe9a61bfd978565871c472125174c0d8e463e5b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8332
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50