Protein
- Genbank accession
- XSD93967.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Seq2Symm
-
C3 confidence 1,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).C3 1,000 C1 0,016 C2 0,002 - Protein sequence
-
MLNNLNQPKGSTIGVLKDGRTIQEAFDQLDPVVSLSSTVSLATAVARLQITGGTIVVPAGTWEVPNLLNVPPSIQIIGRGNSSILKQPASSTSKGVLQFVLNNPTDSVRVDNLSIVTERPYQADNIAIRVDLRPQLSGDQIANRNVRRGSLTNLSIRGSTARTDGVSFGIGIDLVSTGWITLDNIHVVGSSSTATPYGFRGVGICQRGDGKPVETIIRGLMAVSLEYAYLCPEYTEGVYLTDSGAVNCKWGVVVSPVADYVIGKLGQVGGYQFVVDQFHPNVSQGGIFLSKCRYSFVSNVMAILDDHSVSSAVLTVHLRDSSYCNVNAVTAVSYNVNGTTGITRQVVVLNNTSDSFVGNISGLTEGTQYENLTNIVRLVNNSQRNEIEGVKGSNANEGISVGAGCGQNSIAKYRFSNVTTPVLDEAGDLNRGNTAAHYETVTPPPSSQEVTLEIVPRGYFSRRPQGFSYTITTPTDASFPIVVFYDRDSSTPTKVVLKVKSGVLGNNLPTVMIGISITLHD
- Physico‐chemical
properties -
protein length: 521 AA molecular weight: 55582,95940 Da isoelectric point: 6,33297 aromaticity: 0,06526 hydropathy: -0,02111
Domains
Domain architecture
XSD93967.1
1
521 aa
STR 14–442 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
XSD93967.1
1
521 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 70 | 70 | 0,8015 |
| Central domain | 71 | 433 | 364 | 0,9905 |
| C-terminal | 434 | 521 | 87 | 0,9884 |
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Coding sequence (CDS)
Genbank protein accession
XSD93967.1
[NCBI]
Genbank nucleotide accession
PQ569706.1
[NCBI]
CDS location
range 38090 -> 39655
strand +
strand +
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAAGAGGCATTCGACCAGCTGGACCCTGTGGTATCCCTTTCGAGTACTGTTAGCTTGGCCACTGCGGTTGCCCGCCTTCAGATTACTGGAGGCACCATCGTGGTTCCTGCGGGTACTTGGGAAGTGCCTAACCTGCTGAACGTCCCTCCGTCAATTCAAATCATCGGTAGAGGCAATAGCTCAATCCTGAAGCAGCCAGCAAGCTCCACCTCGAAGGGTGTCCTTCAGTTCGTTCTGAACAACCCTACCGATTCCGTGCGAGTGGATAACCTTAGTATCGTAACTGAGCGTCCCTATCAGGCAGATAACATCGCCATTCGGGTTGACCTTCGGCCTCAGCTGTCCGGTGACCAGATAGCGAACCGCAACGTCAGACGTGGGTCACTTACCAACCTGAGCATACGAGGGTCTACTGCCCGTACCGATGGGGTATCTTTCGGCATAGGTATCGACTTGGTGTCAACAGGTTGGATTACCTTGGACAACATTCACGTCGTAGGGTCAAGCTCTACAGCGACACCTTATGGGTTCCGTGGGGTCGGCATCTGCCAGCGTGGTGACGGGAAACCTGTGGAGACAATCATTCGCGGACTGATGGCGGTTAGCTTAGAGTATGCCTACCTTTGCCCTGAGTACACCGAGGGTGTCTACCTTACGGATTCTGGGGCGGTTAACTGTAAGTGGGGCGTTGTGGTGTCCCCGGTAGCTGACTACGTGATTGGTAAACTTGGGCAGGTTGGTGGTTATCAATTCGTCGTAGACCAATTCCACCCCAACGTTAGTCAGGGTGGAATCTTCCTGTCTAAGTGTAGATACTCATTTGTATCTAACGTCATGGCCATACTGGATGACCACTCGGTATCCTCAGCTGTTCTTACGGTGCACCTTCGTGACAGCTCCTACTGCAACGTCAATGCGGTAACGGCTGTCTCTTATAACGTTAATGGTACCACTGGGATTACCCGGCAGGTTGTTGTCCTCAATAACACTTCAGATTCCTTCGTAGGGAACATATCAGGGCTCACCGAAGGGACTCAGTACGAGAACTTGACGAACATCGTCCGTCTGGTTAATAACTCTCAGCGTAATGAGATTGAGGGTGTTAAGGGTTCCAACGCTAACGAGGGCATCTCTGTGGGTGCTGGCTGTGGGCAGAACTCTATCGCCAAGTACAGATTCAGCAACGTGACCACTCCAGTCTTGGACGAGGCGGGTGACCTGAATCGTGGTAACACTGCGGCCCACTACGAGACTGTAACCCCCCCACCGTCCTCTCAAGAGGTCACCTTGGAGATTGTACCTCGTGGGTACTTCAGTCGTCGCCCTCAAGGGTTCAGCTACACGATTACCACACCGACGGACGCCTCGTTCCCTATCGTCGTGTTCTATGACCGAGACTCTAGTACGCCAACCAAAGTGGTGCTTAAGGTTAAGTCGGGTGTATTGGGTAATAACCTTCCTACGGTTATGATTGGAATCTCTATCACGCTACACGACTAA