Protein

View in Explore
Genbank accession
QCQ62098.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFQPTLRLTKGEELTFQEMDDNFQGLADALNNPNTEIQLTAMPSYLSTNITGALVEANDLLPLGGVIVFPAGELVLGASVTIPQNVAWRGQGQFSTSVRRSAPTVKVTMSTATIIKEMQLFASDSGVWVEIPTATLYQKLLSASIRTTGSRCVNIAADGGQELEITGCNIGTGSQLIAGIGLTGVDTAAQPRHFSNNSGSGSPLYDFSGMNDTFVSGGYTLGFFSDATSIKAMITNLRVGGNPNLVDHPIYGENMVIDNCVFSGFVTLYCTDSRIDAICGDYNFIDLGSGNSVEIRGRNYVPSWTASATDPVLGNGTIKGRYSRSGGVVTVSGEIRIGSTTNTGSGIWRVSLPITALSLTWDQPCAGIFEAVGAGKPFQYQGSMIIPTANRDVVEFRYVDSRTNFVQSNTGAEVTAAANKIVLVGYTYQKVVGMAQVYQNGLLLSLADGDYDETFAGGLGIDFTINTVIAPSDVFTVIIPKPAAASVVGGTSSTGDTWPQDTRLRFNFSYFAK
Physico‐chemical
properties
protein length:514 AA
molecular weight: 54502,69620 Da
isoelectric point:4,70101
aromaticity:0,08949
hydropathy:0,06187

Domains

Domains [InterPro]
IPR012334
48–351
IPR012334
QCQ62098.1
1 514
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rheinheimera phage vB_RspM_Barba20A
[NCBI] 		2565661 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCQ62098.1 [NCBI]
Genbank nucleotide accession
MK719731 [NCBI]
CDS location
range 65422 -> 66966
strand +
CDS
ATGGCTTTCCAACCAACTTTAAGATTAACAAAAGGTGAAGAACTCACCTTTCAAGAAATGGATGATAACTTTCAGGGATTAGCTGATGCGTTAAATAATCCCAATACGGAAATACAGTTAACCGCAATGCCTTCATACCTTAGTACAAATATTACAGGCGCTTTGGTTGAGGCTAATGATTTATTACCTCTTGGGGGTGTTATAGTCTTTCCCGCTGGGGAGCTTGTATTAGGTGCTTCGGTAACAATACCACAAAATGTGGCTTGGCGAGGTCAGGGACAGTTTTCAACATCAGTAAGGCGTTCAGCACCTACTGTCAAGGTTACAATGTCTACAGCCACCATCATCAAAGAGATGCAATTGTTCGCTTCTGATTCTGGTGTGTGGGTTGAGATTCCAACAGCCACTTTGTATCAAAAGTTACTGTCTGCATCTATCAGGACTACTGGTAGTCGGTGCGTTAATATTGCGGCTGATGGTGGGCAAGAGTTAGAGATTACAGGGTGTAATATAGGTACTGGCTCGCAATTAATAGCAGGTATTGGGTTAACTGGTGTGGATACAGCGGCACAACCAAGGCACTTTAGTAACAATTCTGGTTCAGGTTCACCATTGTATGACTTTAGTGGTATGAATGATACTTTTGTTTCTGGCGGTTACACGTTAGGGTTCTTTAGTGATGCTACGTCTATTAAAGCTATGATTACTAACCTACGAGTAGGTGGTAATCCCAATTTAGTTGACCATCCGATATACGGCGAAAACATGGTTATTGATAATTGTGTATTTAGTGGTTTTGTTACGCTTTATTGCACCGATAGTCGCATTGATGCCATTTGTGGGGATTACAATTTTATTGATTTAGGCTCAGGTAACAGTGTAGAAATTCGCGGCAGAAACTATGTTCCATCATGGACTGCATCTGCAACAGATCCAGTGTTAGGCAACGGCACCATTAAAGGGCGCTACTCCCGCTCAGGTGGCGTTGTCACTGTTAGCGGTGAAATCAGAATTGGCTCAACCACCAACACAGGATCTGGAATTTGGCGCGTAAGCTTGCCAATTACCGCGTTAAGCTTAACGTGGGATCAGCCCTGTGCAGGTATATTTGAAGCAGTAGGGGCTGGAAAGCCGTTTCAATATCAAGGATCCATGATTATACCGACAGCAAACCGTGACGTTGTAGAATTTAGATACGTTGACAGCCGAACAAACTTTGTTCAGTCAAATACTGGCGCAGAAGTTACGGCGGCAGCAAATAAGATTGTACTGGTTGGGTATACATATCAAAAAGTTGTTGGCATGGCGCAGGTTTACCAGAATGGGCTTTTATTGTCATTGGCTGATGGTGATTATGATGAAACCTTTGCTGGCGGATTAGGCATTGATTTTACAATTAACACAGTTATAGCCCCATCTGATGTGTTTACCGTTATAATACCAAAACCCGCAGCAGCAAGTGTGGTGGGCGGTACGTCAAGCACTGGTGACACTTGGCCTCAAGATACCCGCTTACGCTTTAATTTCAGCTACTTTGCAAAGTAA

Tertiary structure

PDB ID
ec0ea3ea919039dbe014bb6762e2a4fc167cfda738ddcaa16693c2ac74d95ff1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7889
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and seasonal variations among aquatic phages infecting the Baltic Sea Gammaproteobacteria Rheinheimera sp. bal341 Nilsson,E., Li,K., Fridlund,J., Sulcius,S., Bunse,C., Karlsson,C.M.G., Lindh,M., Lundin,D., Pinhassi,J. and Holmfeldt,K. 2019-09-15 — GenBank