Protein

View in Explore
Genbank accession
XBW78106.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MELKTFFAQDKFGNLVPGATVTVYNAGTTNLATGLKDQSGAALSNPFNADQSGKIAYQAPNGTYDMVIGTAEGTTSRIALQFFDYQSVVDAQNQTSANLAAQQALLTQTQDIINGAGDQSTLVRLNQPDGLNLIGAAPEGYGNPPTTPSHLNDVIKRVTPFQFGAKGDGVTDDSDAIQAAHDWCMQQSSRDAADPTRRIGGYVLDLNGPKYWLIKKPLKLNFGSINIEFGKSTLDCRQFPVGADANNHTVVISATYAGAYQQTRAWWSDLNMLGPGQESFCTAVRCNMTSAVPGGYERLCNVLYGGGIEQFGRGLSVGSNCYFLTCYNLSFGHCNEAYYFEPGGKNYGEQITFYSCVFNAGNYQVTTYGGMSNFYGCSFDYCYHQQMKLLGGMVNCVNCWWEGYGPVDYIINIPESTTSVRLNIIGGLFSFKAGATGAESRATSNPFYFGTRASVKFENVQFQKLGNAYYGDSTTAWIDGASQGVSFSGCYFPNSANSFTTVIMNSDPSVINNQFATESYTLGIGAENWLGDTWILPNSDNGLVRKNRWGYGLSNGGTTFSFTRTSNGFVNLDVTQPANSGTFEAVIGTIPVKSTGQVVHYVSGNLYLGTGDGSVNIKTYWVKLIVKGTPDNPDEPRILQMVKATDVNYPIGGTSGQLHSFRWPPSMPTGTQSPASTTVAPDWATHCIMTLDISKIKRNMGGIRINEVFMRQI
Physico‐chemical
properties
protein length:713 AA
molecular weight: 77248,39750 Da
isoelectric point:5,58013
aromaticity:0,11641
hydropathy:-0,24264

Domains

Domains [InterPro]
IPR012334
118–604
IPR012334
IPR011050
156–539
IPR011050
XBW78106.1
1 713
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Spe5P4
[NCBI] 		3159438 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBW78106.1 [NCBI]
Genbank nucleotide accession
PP858852.1 [NCBI]
CDS location
range 46817 -> 48958
strand -
CDS
ATGGAATTAAAAACCTTCTTTGCGCAAGATAAGTTCGGCAACCTTGTGCCTGGCGCAACAGTAACAGTCTACAACGCCGGCACAACCAACCTCGCAACTGGCCTGAAAGATCAGAGTGGCGCGGCATTGTCAAACCCGTTTAACGCAGATCAGAGCGGTAAAATCGCATATCAGGCTCCAAACGGAACATATGACATGGTCATTGGTACTGCAGAGGGCACGACTAGTCGAATTGCCCTTCAATTCTTCGATTACCAAAGTGTAGTGGATGCGCAGAACCAAACTAGTGCCAACTTGGCGGCGCAACAAGCCCTGCTTACTCAGACCCAGGACATCATCAACGGAGCCGGTGACCAATCGACTCTGGTCAGACTCAACCAGCCGGATGGCCTAAACCTTATCGGCGCGGCACCAGAGGGGTATGGCAATCCGCCGACTACCCCATCGCACCTGAATGACGTCATAAAGCGAGTGACGCCATTCCAATTTGGCGCAAAGGGCGACGGTGTTACTGACGATTCCGATGCGATACAAGCAGCGCATGATTGGTGCATGCAACAATCTTCAAGGGACGCGGCGGATCCCACTCGAAGGATTGGCGGATATGTACTTGATTTGAATGGGCCAAAATACTGGCTGATCAAGAAGCCGCTGAAATTAAACTTCGGCAGTATCAACATCGAGTTTGGCAAGTCAACCCTTGATTGCCGCCAGTTCCCTGTCGGAGCCGACGCAAACAATCACACGGTCGTAATCAGCGCAACATACGCTGGCGCGTATCAGCAAACACGTGCGTGGTGGAGCGACCTGAACATGTTGGGGCCAGGTCAGGAATCGTTCTGCACGGCGGTTCGTTGTAACATGACTTCAGCAGTTCCTGGTGGATACGAGCGCCTTTGCAACGTCCTGTACGGCGGCGGAATCGAACAATTCGGGCGTGGCCTCTCTGTTGGCTCCAACTGCTATTTCTTGACTTGTTACAACCTTTCGTTTGGGCATTGTAATGAGGCTTATTACTTCGAGCCTGGTGGCAAGAACTATGGCGAACAAATCACATTCTATTCTTGTGTATTCAACGCCGGAAACTACCAGGTCACAACGTATGGTGGCATGAGCAACTTCTATGGATGCTCATTCGACTATTGCTATCACCAGCAAATGAAGTTGTTGGGCGGCATGGTGAACTGCGTTAATTGTTGGTGGGAGGGTTATGGCCCAGTTGATTATATCATCAACATCCCAGAGTCAACGACGTCAGTGCGATTGAACATCATCGGCGGATTGTTCTCATTCAAAGCTGGCGCGACTGGCGCTGAGTCAAGGGCGACGAGCAACCCATTCTATTTCGGAACCAGGGCGTCAGTTAAATTTGAGAATGTTCAGTTCCAGAAGTTGGGCAATGCGTATTATGGTGACAGCACCACCGCATGGATTGACGGAGCGTCGCAGGGCGTTTCATTTAGTGGATGTTATTTCCCGAACAGCGCAAACTCTTTCACGACCGTGATCATGAACTCAGACCCATCGGTGATCAACAACCAATTTGCAACCGAAAGCTACACGCTTGGTATTGGGGCTGAAAACTGGCTGGGTGATACGTGGATACTTCCGAATTCCGACAACGGATTGGTTAGAAAGAATCGCTGGGGATATGGGCTGTCAAATGGCGGCACCACATTTTCCTTCACAAGAACATCAAACGGATTCGTGAACCTTGATGTCACCCAGCCAGCCAACTCAGGCACCTTTGAAGCGGTCATAGGCACCATTCCTGTAAAAAGTACAGGCCAGGTTGTTCACTATGTATCCGGCAATTTGTATCTTGGCACAGGCGACGGATCAGTGAACATCAAGACTTACTGGGTTAAATTAATCGTCAAGGGAACGCCAGACAATCCTGATGAACCTAGAATCCTTCAGATGGTTAAGGCCACTGACGTGAACTATCCAATCGGAGGAACTTCAGGGCAGCTTCACTCATTCAGGTGGCCGCCATCAATGCCGACCGGCACCCAATCGCCTGCATCAACTACAGTTGCGCCTGATTGGGCAACCCATTGCATTATGACTTTGGATATTTCAAAGATCAAACGTAATATGGGCGGCATCCGAATCAATGAAGTGTTCATGCGCCAAATCTAA

Tertiary structure

PDB ID
c0e2bf321d4c19bbb38d53856166aaecd1a8d4e29e2a87de67f79b65a8b1e138
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6966
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50