Protein

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Genbank accession
WHM52723.1 [GenBank]
Protein name
host specificity protein J
RBP type
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence Phold
Probability 1,00
Protein sequence
MPPVIIGVAVGVAASVAGATLLTAVAIGMAAAGLYAVATMDIPKTPGTSPSNAKQTIRSPNQPFRAIVGTAMVGGPMLFAEEYSNSIDVQEEYEHCTYYHGGKHCEKRTRTVTKTNKYLHLVIPLACHPCEDVVEVYFGDDKQDNWDHEYWKINVIKGDQQSVADLPKMLTDVPSWTDKMVGKGVTFVHVALRHSAEHFPNGLPNIKCLVQGMKLDTPMFKGFTNNAAAVVYHFLRHHFRAKESEINTLSFRDAYSVCGELMYSEQPAPDPDDPSAPTPAVPIRYAIDGIYDFDESYENIMNKMLAACGGKLLYTNGQYHLHVAAYRGPAPQDQVVKLSDLNGPIQIVPDTPLGDRINTVKGQHLDPNNFYQQVDFEPVTHPDYVAEDGEELTKDLDLEYVLNPHQAYRLANIVLKENRYGLTVTVPMNLRGFKFNAGLPVRFDEKEFGYDQLEFEVASWKLTDGKGIELVLKQTAAEIFDDAVAVVTPKPPSTNIPDPKFCHPVQNLIFQPFLDDGVYDGLLLWSHPDIDNVREFEVVVTSTDGQIFKYQPGKALELYLDNMPKSDYNITVIGYNIYGAPSAPVSIQADVGSTKPITNVVFEADNFEMNIIPKVSGILPSNTTFLFYRANNVNNPSPTDVTLLGQGVTYVDVGLIPNTAYKYYVQVTNSATFSELYGPYSAKTTDNPDDIYDFIKDQIPGQYTWVVYASDAFGADISKTYNPAIHHFEGRAYNKGTETPSLNPLDYTFIRIGEFISPEDQDILDNLAQGKLPDGSADLVKPSDVLFKPGDKVTGTNIADGAISTPKLTANAVTSDKIIANAVTTAKIAAGAVTATQIAANAITASKILAGAITAEKIAANAITADKIAVTVVSPINNFSEFGDTRGWLLPPSAVLSEAISLNGKKARTLKFVNSPTAYRELKSDKFTVDHNAIYEVRFSYYSGQTSQGVKTALRLKAYNSANSEVVSDRYHFDTLAKADTTPSPDFWAGSVVNGWRHLVSYIVGASADVNSVPKAINSTYVIKLGADARTLALQSITWPNANIVDTHIYSPSIVKVGSGIIVANEIRANSLITSPVIKGGTVEGVEVIGSTVKGGKGLFGPESGAPYEGHHTRIGTDGTIDTDRLRLNHGKTGSRLEITADAVRVYEGSLLRVVLGKLS
Physico‐chemical
properties
protein length:1160 AA
molecular weight: 126317,14800 Da
isoelectric point:5,38881
aromaticity:0,09138
hydropathy:-0,17259

Domains

Domains [InterPro]
IPR036116
645–689
IPR036116
WHM52723.1
1 1160
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_1601
[NCBI] 		3038270 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHM52723.1 [NCBI]
Genbank nucleotide accession
OQ719603 [NCBI]
CDS location
range 24626 -> 28108
strand +
CDS
ATGCCACCAGTGATAATAGGTGTAGCCGTAGGCGTAGCTGCTTCGGTAGCAGGTGCTACACTTCTAACCGCAGTAGCAATCGGTATGGCCGCTGCTGGGTTGTATGCTGTTGCTACTATGGACATCCCAAAAACTCCAGGCACAAGCCCATCAAACGCCAAGCAGACCATACGATCGCCTAACCAGCCATTCAGGGCAATAGTAGGCACTGCAATGGTTGGCGGACCTATGCTGTTCGCTGAAGAGTACAGCAACTCGATAGATGTTCAGGAAGAGTACGAGCACTGCACTTACTACCACGGCGGCAAGCATTGTGAGAAAAGAACTCGTACGGTAACCAAAACAAACAAGTACTTGCACCTTGTAATACCTTTAGCGTGCCACCCTTGTGAAGATGTCGTTGAGGTTTACTTTGGTGACGACAAACAAGACAACTGGGATCACGAGTATTGGAAGATAAACGTAATTAAAGGCGATCAGCAAAGTGTTGCCGACCTTCCTAAGATGCTTACCGATGTCCCGTCATGGACGGATAAAATGGTAGGCAAAGGTGTAACTTTTGTGCATGTAGCACTGCGCCATAGCGCTGAGCACTTCCCTAACGGCCTGCCTAATATAAAGTGTTTGGTGCAAGGGATGAAGCTTGACACTCCTATGTTTAAAGGCTTCACAAACAATGCCGCTGCTGTGGTATACCACTTTCTTCGTCATCACTTCAGAGCTAAAGAGAGTGAGATCAACACACTATCATTCAGAGACGCATATTCAGTTTGTGGCGAACTGATGTACTCTGAGCAGCCTGCGCCAGATCCTGATGATCCTTCTGCACCTACTCCTGCTGTCCCTATCCGCTACGCAATAGACGGCATCTACGACTTTGACGAGTCGTACGAAAACATCATGAACAAGATGCTTGCTGCATGCGGAGGTAAGTTGTTGTACACCAACGGCCAGTACCATTTGCACGTTGCAGCGTACAGAGGACCAGCACCGCAAGACCAAGTTGTAAAGCTTTCAGACCTTAACGGTCCTATACAAATAGTCCCAGATACCCCGTTAGGCGATCGAATAAATACGGTGAAAGGGCAGCATTTAGACCCTAACAACTTCTACCAACAAGTAGACTTTGAGCCTGTGACCCACCCTGATTACGTGGCAGAAGACGGAGAAGAGCTTACAAAAGACTTAGACCTTGAGTACGTCCTAAACCCACATCAGGCTTATCGCCTCGCTAACATCGTACTTAAAGAGAACAGATATGGTCTAACTGTCACAGTCCCTATGAACTTGAGAGGGTTTAAGTTCAACGCTGGTCTTCCTGTACGCTTCGACGAGAAAGAGTTTGGATATGACCAGTTAGAGTTCGAAGTTGCCTCTTGGAAGTTGACAGACGGTAAAGGTATCGAGTTGGTTCTTAAACAGACTGCGGCAGAAATATTTGATGATGCAGTGGCTGTTGTTACCCCTAAACCACCGTCAACTAACATACCTGACCCTAAATTCTGCCACCCTGTGCAAAATCTGATCTTCCAGCCGTTCTTGGACGATGGTGTCTATGATGGTCTTCTTCTTTGGTCTCATCCTGATATAGACAATGTTAGAGAATTTGAAGTTGTTGTCACGTCTACTGACGGACAAATATTCAAATACCAGCCAGGGAAAGCTTTAGAACTTTACTTGGATAACATGCCTAAGTCTGACTACAACATAACCGTAATTGGTTACAATATTTACGGAGCGCCTTCAGCTCCTGTATCTATACAAGCAGATGTTGGCTCTACTAAACCTATCACTAACGTAGTGTTCGAAGCTGACAACTTTGAGATGAACATCATCCCTAAAGTTAGCGGCATACTCCCTAGCAACACTACGTTCTTGTTTTACAGAGCTAATAACGTCAACAACCCAAGCCCTACAGACGTCACACTCTTAGGTCAAGGCGTAACTTATGTTGATGTGGGATTAATACCTAATACGGCTTACAAGTATTATGTTCAGGTGACTAATAGCGCCACGTTCTCAGAGTTGTACGGACCTTACTCCGCTAAGACTACAGACAACCCAGATGACATCTACGACTTTATTAAAGATCAGATACCTGGGCAGTATACCTGGGTTGTTTATGCCTCTGATGCATTTGGGGCAGACATAAGCAAGACTTACAATCCGGCTATCCACCACTTTGAAGGGCGTGCATACAATAAAGGTACTGAAACCCCTAGTTTAAATCCTCTTGATTACACGTTCATCCGTATTGGCGAGTTCATTTCTCCCGAAGACCAAGACATTTTAGACAATCTCGCACAGGGTAAGCTTCCTGACGGCTCCGCTGATTTGGTTAAGCCTAGCGATGTTTTGTTTAAGCCAGGAGACAAAGTCACCGGTACTAACATAGCTGACGGCGCTATCAGCACACCTAAACTAACTGCCAATGCAGTGACTTCTGACAAGATAATAGCTAACGCAGTGACTACAGCAAAGATAGCCGCTGGTGCTGTTACTGCAACACAGATAGCCGCTAACGCCATCACCGCCAGTAAGATTCTTGCCGGAGCAATCACAGCAGAGAAAATAGCTGCAAATGCTATCACAGCAGACAAGATAGCGGTAACAGTAGTCTCACCTATCAATAACTTCAGTGAGTTTGGTGATACTAGAGGATGGCTCTTACCTCCTAGCGCAGTCTTATCAGAAGCAATAAGTCTTAACGGAAAGAAAGCCAGAACCCTTAAGTTTGTAAACAGTCCGACAGCGTACAGAGAGCTTAAGTCTGATAAGTTCACAGTAGACCACAACGCTATATACGAAGTTCGGTTCTCTTACTACAGCGGTCAGACATCTCAGGGAGTTAAAACCGCCCTCAGACTGAAAGCATATAACTCTGCTAACTCTGAGGTAGTCTCAGACAGATACCACTTTGACACGCTAGCAAAAGCAGACACTACCCCGAGCCCAGACTTCTGGGCGGGCTCAGTTGTAAACGGTTGGCGCCATTTAGTCTCATATATAGTGGGAGCTTCTGCAGACGTAAACTCAGTACCTAAAGCCATTAACTCAACTTACGTCATAAAGCTAGGGGCTGACGCTAGGACACTAGCACTCCAAAGCATTACTTGGCCTAACGCTAACATAGTTGATACCCACATCTACTCTCCTTCAATCGTTAAAGTAGGCAGCGGCATTATAGTCGCTAATGAGATAAGAGCTAACTCTCTGATCACCTCCCCTGTAATTAAAGGCGGTACGGTTGAAGGCGTTGAGGTTATAGGCTCTACAGTAAAAGGTGGTAAAGGTTTGTTTGGTCCAGAAAGTGGCGCGCCGTATGAAGGTCACCATACCAGAATAGGCACTGACGGAACTATCGACACCGACAGACTTAGACTTAATCACGGAAAGACTGGCAGCAGGCTAGAGATAACTGCGGACGCTGTTCGAGTTTACGAAGGTAGTCTACTTCGTGTAGTACTTGGAAAATTATCATGA

Tertiary structure

PDB ID
80140f5da92bae5271b9a8e299a4c0a1cd0d6a0982cd824c41eeea94126b598b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7117
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50