Protein

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Genbank accession
YP_010669442.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,51
Seq2Symm
C1 confidence 0,918
C1 0,918
C2 0,066
C3 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MARTQCISVIDESIGNQARNNYNSNPPPAPNPQSVSSSAQAIANDWAWFRDEYPDREFWLLQPGRSFPDLLRPTSFINDPLTNTFSVNRDNGSIANRSDWFAICNLQNQPPGAYVALWLDISGSMVLNTVRASYDYFFDRCEAAGINVVLTVSDRGERWSAEHVVDFPPSVTISASPPSVNLGGTPSSSVLTWDVFGDFTSATIDNGIGTVAGPGNITVTPTETTTYTITATGPAGTSTSQVTVTVIVPDPPTITFGGDPISYINPGTSTLNWEVTGILIESVSINQGIGTVGVTGSTTVNPNTSTSYTLTATNPGGTSTAGFTLVVYQPVGVSITASPNPIAAGQTTTLSWSVSGDADTASIDNGIGSVLFNSSTQVSPPVTTTYTLSASGNGGADSDTVTVNVCQTPELSGSFPTQTNFGNDFTVPIEYRYASGGVEIEIEYQSAYGVLDTETRTLTGTTSDDSGASITTNFQSNIPWDTTGDDAGPAVITYTLRALQTDPCSGETTIGPYTVNVNIDLQADNINIPDSLDQIPSADPVESPDRDTVISDPIEITDIDINVEIKASQPIQVRFDNDDPDIESNWKSLRQIT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 62784,82110 Da
isoelectric point:4,05003
aromaticity:0,07757
hydropathy:-0,20725

Taxonomy

Phage
Synechococcus phage S-H9-2 [NCBI] · taxon 2783669
Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Yushanluvirus Yushanluvirus satich
Host
Synechococcus sp. WH 8102 [NCBI] · taxon 84588
Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Parasynechococcus Parasynechococcus marenigrum

Coding sequence (CDS)

Genbank protein accession
YP_010669442.1 [NCBI]
Genbank nucleotide accession
NC_070960 [NCBI]
CDS location
range 171938 -> 173719
strand +
CDS
ATGGCTAGAACACAATGTATTTCGGTTATTGATGAATCAATTGGTAACCAGGCAAGAAATAACTACAACTCAAATCCACCACCTGCACCTAATCCACAGAGTGTATCCAGTAGTGCTCAAGCAATTGCAAATGATTGGGCATGGTTTAGGGATGAATATCCTGATCGTGAGTTTTGGTTGTTACAACCAGGCAGAAGTTTTCCTGATCTGTTGAGACCAACATCATTTATTAATGATCCACTCACCAATACTTTTTCCGTTAACAGAGATAATGGATCTATAGCTAATAGATCTGATTGGTTTGCAATTTGCAATTTGCAGAATCAACCTCCAGGAGCATATGTTGCATTGTGGTTAGATATTTCGGGTTCAATGGTGTTAAACACTGTTAGAGCATCATATGATTATTTTTTTGATAGATGTGAAGCAGCAGGAATTAATGTTGTTCTAACTGTTAGTGATAGAGGTGAGAGGTGGTCAGCTGAACACGTTGTTGACTTTCCTCCCAGTGTTACAATTTCTGCAAGTCCTCCATCTGTAAATTTAGGAGGAACTCCAAGTAGTTCTGTTCTTACATGGGACGTTTTCGGTGACTTTACTTCAGCAACAATTGATAATGGTATTGGAACAGTTGCTGGTCCTGGAAATATAACAGTAACTCCAACAGAAACAACAACTTATACTATTACTGCTACTGGTCCTGCAGGAACAAGTACATCACAAGTAACTGTTACTGTTATAGTTCCTGATCCACCTACAATTACATTTGGTGGTGATCCAATATCGTATATCAATCCAGGTACATCTACTCTTAATTGGGAAGTTACTGGTATTCTTATTGAGTCGGTTAGTATTAACCAAGGTATTGGAACAGTGGGTGTGACAGGAAGTACAACAGTCAATCCAAATACTTCAACGTCTTATACTTTAACGGCAACTAACCCAGGAGGAACTTCGACAGCAGGTTTTACTCTTGTTGTTTATCAACCAGTTGGAGTAAGTATTACTGCATCTCCTAATCCTATTGCTGCTGGTCAAACTACAACCTTATCTTGGAGTGTTTCTGGTGATGCCGACACTGCTTCTATTGATAATGGTATTGGATCAGTGTTGTTTAACAGTTCAACACAAGTATCTCCTCCAGTTACAACAACTTATACATTGAGTGCATCTGGTAATGGTGGTGCTGACTCAGATACTGTTACAGTTAATGTTTGTCAAACACCAGAATTAAGTGGCAGTTTCCCAACACAGACTAATTTTGGAAATGACTTTACTGTTCCTATCGAATATAGATATGCATCTGGAGGTGTTGAAATTGAAATTGAATATCAGAGTGCATATGGAGTTTTAGATACAGAGACCAGAACATTAACTGGTACTACTTCAGATGATAGTGGGGCATCAATTACAACAAACTTCCAGTCAAATATACCATGGGATACTACTGGAGATGATGCTGGTCCTGCAGTTATCACATACACACTTAGAGCATTGCAAACAGATCCTTGTTCTGGTGAAACGACAATTGGACCATACACTGTTAATGTAAATATTGATCTTCAGGCAGATAATATTAACATTCCAGATAGTTTAGATCAAATTCCATCTGCTGATCCTGTTGAATCTCCTGATAGAGATACTGTAATAAGCGATCCGATTGAAATTACTGATATTGATATCAATGTAGAAATCAAAGCATCTCAACCCATTCAAGTCAGGTTTGATAATGATGATCCTGACATTGAGTCCAATTGGAAATCCTTACGACAAATAACCTAA

Genome Context

Tertiary structure

YP_010669442.1
ESMFold2 structure
Source ESMFold2
pLDDT 65.7
Oligomeric state monomer
Download structure