Protein

View in Explore
Genbank accession
QQG33610.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Seq2Symm
C6 confidence 0,984
C6 0,984
C3 0,005
C5 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGTKPLVHLINRDSVEQYYVVFTGQGVRVFDLNGKEYAVTGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVHADTAPLYNLKENGDCLINVRGGQYGRTLAFTINGVRIAYKIHNGVGDGAEQAVQETDAQWLVNKLAGLARAHGSFKDWEFNEGPGFIHVIAPGNSQINSLSTEDGYANQLMNAVMHTSQSFSKLPIEAPDGYTVKIVGDTSKTSDQFYVQYDNVKKVWKEVAGWGVQKGLNGGTMPHALVRQPDGSFQMQALPWSQRTCGDMDTNPTPSIVDQTINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSSTENFISVLSANAPSKIFLYKFLYLNEEIAQQSWSHWELGSNITVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPKGAYNDDTYTTTVKPVDIYGMEYWTGKFYIVASDGLVSWFDPPRGGWPTGVPVLSMSGNREGETIYVGLAINFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNALRAGGLNVGTGQFRFPVTGNAQLNEVRITSDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 88185,09310 Da
isoelectric point:5,97227
aromaticity:0,11195
hydropathy:-0,26302

Domains

View on InterPro
Domain architecture
QQG33610.1
1 795 aa
TTP 1–795
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QQG33610.1
1 795 aa
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9938
Central domain 142 346 206 0,1208
C-terminal 347 795 448 0,2195
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pectobacterium phage PcCB251 [NCBI] · taxon 2798045
Uroviricota Caudoviricetes Autographivirales Autotranscriptaviridae Berlinvirus Berlinvirus PcCB251
Host
Pectobacterium sp. [NCBI] · taxon 1913084
Pseudomonadota Gammaproteobacteria Enterobacterales Pectobacteriaceae Pectobacterium Pectobacterium sp.

Coding sequence (CDS)

Genbank protein accession
QQG33610.1 [NCBI]
Genbank nucleotide accession
MW367418 [NCBI]
CDS location
range 24469 -> 26856
strand +
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCGAACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGTTGGTCTTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTACCAAACCTCTCGTTCACCTCATCAACCGCGATAGTGTCGAACAGTATTACGTGGTGTTTACCGGACAGGGTGTTCGTGTGTTCGACCTCAATGGTAAAGAGTATGCTGTGACTGGTGACCTGTCCTACGTTAAGGTTGGGAACCCACGAGATGACTTAAGGATGGTCACTGTGGCTGACTATACGTTTATCGTAAACCGTAACATGGTGGTACACGCTGACACTGCCCCTCTGTATAACCTTAAGGAGAATGGGGACTGTTTGATTAACGTCCGTGGCGGTCAGTATGGTCGTACACTGGCATTCACTATTAACGGTGTCCGTATTGCCTATAAGATTCACAATGGTGTTGGTGATGGTGCTGAACAGGCTGTACAGGAGACTGACGCACAGTGGCTCGTTAATAAACTAGCTGGCCTTGCTCGTGCTCATGGTTCCTTTAAGGACTGGGAGTTCAACGAAGGGCCGGGGTTCATCCATGTGATTGCTCCGGGTAACAGCCAGATTAATTCACTGTCCACTGAGGATGGATATGCTAACCAGTTGATGAACGCAGTTATGCACACCAGTCAGTCATTCAGTAAGTTGCCTATTGAGGCACCTGATGGCTACACAGTGAAGATTGTCGGTGACACCTCTAAGACTTCCGACCAGTTCTACGTTCAGTACGACAACGTGAAGAAGGTATGGAAAGAGGTGGCTGGTTGGGGCGTACAGAAGGGACTCAATGGTGGCACGATGCCTCATGCTCTTGTGCGCCAGCCTGATGGTTCATTCCAGATGCAGGCCCTTCCGTGGTCACAGCGTACCTGTGGTGACATGGACACTAACCCGACTCCGTCTATTGTTGACCAGACGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCCCGTACATCCAAGTATTTCTCATTGTTCCCTGCATCCGTGGCTAACCTGTCCGATGATGACCCGATAGACGTAGCAGTGTCCCACAACCGTATCTCCATCCTGAAGTACGCTGTACCGTTCTCCGAAGAGTTGCTCCTATGGTCAGACCAAGCACAGTTCGTACTGTCTGCTCAAGGTATCCTCTCACCGAAGTCCGTAGAGTTGAACCTTACGACCGAGTTCGATGTATCAGACCGAGCTAGACCTTTTGGTGTTGGGCGTGGTGTGTACTTTGCGTCACCTCGTGCTTCCTATACATCACTTAACCGTTACTATGCGGTACAGGATGTCAGCTCTGTGAAGTCCGCTGAGGACATGAGTGCTCACGTTCCGAGCTACATCCCGAACGGTGTGTTCTCTATTCGTGGTTCCAGTACTGAGAACTTTATCTCTGTGCTCTCTGCGAATGCTCCTAGCAAAATCTTCCTCTATAAATTCCTCTACTTGAATGAAGAGATTGCCCAACAGTCGTGGTCGCATTGGGAACTTGGAAGCAACATTACCGTACTGGCCTGTGACTCTATCGGCTCCACCATGTACCTTGTGTTGCGCAACCAGTCCCACACGTGGATGTGCCGTGCCCACTTTACGAAGAACAGTATTGACTTCCCTGATGAACCATACCGTCTGTACATTGACAATAAGGTGAAGTATGTGATTCCTAAAGGTGCATATAATGATGACACTTACACTACCACTGTGAAGCCTGTAGACATCTATGGGATGGAATACTGGACTGGTAAGTTCTACATTGTGGCCTCTGACGGTCTAGTCTCTTGGTTCGACCCTCCGCGCGGTGGTTGGCCTACTGGTGTCCCTGTGTTGTCAATGAGTGGGAATCGTGAGGGTGAGACAATCTACGTCGGCTTGGCTATCAACTTCCGTTATGTGTTCTCTAAGTTCCTCATCAAGAAGACCGCTGATGATGGCTCGACAGCTACCGAGGACATTGGGCGCTTGCAGTTACGCCGAGCGTGGGTGAACTATGAGGACTCTGGTGCATTCACTGTAGAAGTGGAGAACACCTCTCGACTGTTCAGCTATGACATGGCGGGTGCTCGCTTGGGTTCCAATGCGTTACGCGCTGGTGGACTTAACGTTGGTACGGGTCAGTTTCGCTTCCCGGTTACTGGCAACGCACAGTTGAATGAAGTACGCATTACCTCTGACCATACTACGCCATTGAACGTTATTGGCTGTGGCTGGGAGGGTAACTACCTGCGTCGTTCTTCTGGTATCTAA

Genome Context

Tertiary structure

QQG33610.1
ESMFold2 structure
Source ESMFold2
pLDDT 88.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequences of novel berlinvirus and novel certrevirus lytic for Pectobacterium car. car Petrzik,K., Kmoch,P., Vacek,J. and Brazdova,S. 2021-04-29 33914264 GenBank