Protein

View in Explore
Genbank accession
QQG33610.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,55
Protein sequence
MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGTKPLVHLINRDSVEQYYVVFTGQGVRVFDLNGKEYAVTGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVHADTAPLYNLKENGDCLINVRGGQYGRTLAFTINGVRIAYKIHNGVGDGAEQAVQETDAQWLVNKLAGLARAHGSFKDWEFNEGPGFIHVIAPGNSQINSLSTEDGYANQLMNAVMHTSQSFSKLPIEAPDGYTVKIVGDTSKTSDQFYVQYDNVKKVWKEVAGWGVQKGLNGGTMPHALVRQPDGSFQMQALPWSQRTCGDMDTNPTPSIVDQTINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSSTENFISVLSANAPSKIFLYKFLYLNEEIAQQSWSHWELGSNITVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPKGAYNDDTYTTTVKPVDIYGMEYWTGKFYIVASDGLVSWFDPPRGGWPTGVPVLSMSGNREGETIYVGLAINFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNALRAGGLNVGTGQFRFPVTGNAQLNEVRITSDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 88185,09310 Da
isoelectric point:5,97227
aromaticity:0,11195
hydropathy:-0,26302

Domains

Domains [InterPro]
IPR058003
1–795
IPR058003
QQG33610.1
1 795
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PcCB251
[NCBI] 		2798045 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG33610.1 [NCBI]
Genbank nucleotide accession
MW367418 [NCBI]
CDS location
range 24469 -> 26856
strand +
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCGAACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGTTGGTCTTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTACCAAACCTCTCGTTCACCTCATCAACCGCGATAGTGTCGAACAGTATTACGTGGTGTTTACCGGACAGGGTGTTCGTGTGTTCGACCTCAATGGTAAAGAGTATGCTGTGACTGGTGACCTGTCCTACGTTAAGGTTGGGAACCCACGAGATGACTTAAGGATGGTCACTGTGGCTGACTATACGTTTATCGTAAACCGTAACATGGTGGTACACGCTGACACTGCCCCTCTGTATAACCTTAAGGAGAATGGGGACTGTTTGATTAACGTCCGTGGCGGTCAGTATGGTCGTACACTGGCATTCACTATTAACGGTGTCCGTATTGCCTATAAGATTCACAATGGTGTTGGTGATGGTGCTGAACAGGCTGTACAGGAGACTGACGCACAGTGGCTCGTTAATAAACTAGCTGGCCTTGCTCGTGCTCATGGTTCCTTTAAGGACTGGGAGTTCAACGAAGGGCCGGGGTTCATCCATGTGATTGCTCCGGGTAACAGCCAGATTAATTCACTGTCCACTGAGGATGGATATGCTAACCAGTTGATGAACGCAGTTATGCACACCAGTCAGTCATTCAGTAAGTTGCCTATTGAGGCACCTGATGGCTACACAGTGAAGATTGTCGGTGACACCTCTAAGACTTCCGACCAGTTCTACGTTCAGTACGACAACGTGAAGAAGGTATGGAAAGAGGTGGCTGGTTGGGGCGTACAGAAGGGACTCAATGGTGGCACGATGCCTCATGCTCTTGTGCGCCAGCCTGATGGTTCATTCCAGATGCAGGCCCTTCCGTGGTCACAGCGTACCTGTGGTGACATGGACACTAACCCGACTCCGTCTATTGTTGACCAGACGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCCCGTACATCCAAGTATTTCTCATTGTTCCCTGCATCCGTGGCTAACCTGTCCGATGATGACCCGATAGACGTAGCAGTGTCCCACAACCGTATCTCCATCCTGAAGTACGCTGTACCGTTCTCCGAAGAGTTGCTCCTATGGTCAGACCAAGCACAGTTCGTACTGTCTGCTCAAGGTATCCTCTCACCGAAGTCCGTAGAGTTGAACCTTACGACCGAGTTCGATGTATCAGACCGAGCTAGACCTTTTGGTGTTGGGCGTGGTGTGTACTTTGCGTCACCTCGTGCTTCCTATACATCACTTAACCGTTACTATGCGGTACAGGATGTCAGCTCTGTGAAGTCCGCTGAGGACATGAGTGCTCACGTTCCGAGCTACATCCCGAACGGTGTGTTCTCTATTCGTGGTTCCAGTACTGAGAACTTTATCTCTGTGCTCTCTGCGAATGCTCCTAGCAAAATCTTCCTCTATAAATTCCTCTACTTGAATGAAGAGATTGCCCAACAGTCGTGGTCGCATTGGGAACTTGGAAGCAACATTACCGTACTGGCCTGTGACTCTATCGGCTCCACCATGTACCTTGTGTTGCGCAACCAGTCCCACACGTGGATGTGCCGTGCCCACTTTACGAAGAACAGTATTGACTTCCCTGATGAACCATACCGTCTGTACATTGACAATAAGGTGAAGTATGTGATTCCTAAAGGTGCATATAATGATGACACTTACACTACCACTGTGAAGCCTGTAGACATCTATGGGATGGAATACTGGACTGGTAAGTTCTACATTGTGGCCTCTGACGGTCTAGTCTCTTGGTTCGACCCTCCGCGCGGTGGTTGGCCTACTGGTGTCCCTGTGTTGTCAATGAGTGGGAATCGTGAGGGTGAGACAATCTACGTCGGCTTGGCTATCAACTTCCGTTATGTGTTCTCTAAGTTCCTCATCAAGAAGACCGCTGATGATGGCTCGACAGCTACCGAGGACATTGGGCGCTTGCAGTTACGCCGAGCGTGGGTGAACTATGAGGACTCTGGTGCATTCACTGTAGAAGTGGAGAACACCTCTCGACTGTTCAGCTATGACATGGCGGGTGCTCGCTTGGGTTCCAATGCGTTACGCGCTGGTGGACTTAACGTTGGTACGGGTCAGTTTCGCTTCCCGGTTACTGGCAACGCACAGTTGAATGAAGTACGCATTACCTCTGACCATACTACGCCATTGAACGTTATTGGCTGTGGCTGGGAGGGTAACTACCTGCGTCGTTCTTCTGGTATCTAA

Tertiary structure

PDB ID
917507b4eb8cfc7b329cc5bc1767465856414b51ecdcd839041d8054da5ac8c9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2516
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of novel berlinvirus and novel certrevirus lytic for Pectobacterium car. car Petrzik,K., Kmoch,P., Vacek,J. and Brazdova,S. 2021-04-29 — GenBank