Phage RBP Database

Genbank accession

GENB_41e5b752c2db [GenBank]

Protein name

tail spike protein

RBP type

TSP

Evidence DepoScope

Probability 0,98

Seq2Symm

C1 confidence 0,778

C1	0,778
C2	0,030
C3	0,005

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MPKPFAKNSLLSLNNVLIVSPDVIIGASFLIFFTILGVKLGFISVLVSHIAFSIPIVVLMILPKLQEMSPTLMDAARDLGASQWQVLSKVILPYIMPGVLAGFFMALTYSLDDFAVTFFVTGNGFSTLAVEIYSRARQGISLSINALSTLIFLFTIILVIGYYFINQRNTSKNIRTGATKE

Physico‐chemical properties

protein length:	181 AA
molecular weight:	19846,40650 Da
isoelectric point:	9,52032
aromaticity:	0,11602
hydropathy:	0,84586

Domain architecture

GENB_41e5b752c2db

1 181 aa

STR 5–160 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR035906
STR

IPR035906

GENB_41e5b752c2db

1181 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR035906	STR	IPR035906	5	160	Merged direct domain	MetI-like superfamily	Central	Low	Positional only	54 proteins / 54 hits

Proteins with similar domain architecture

Phage

Listeria phage LM 4-11-1 [NCBI] · taxon 3113835

Listeria phage LM 4-11-1

Host

Listeria monocytogenes [NCBI] · taxon 1639

Bacillota Bacilli Caryophanales Listeriaceae Listeria Listeria monocytogenes

Genbank protein accession

OR846721.1_CDS_[complement(46652..47197)] [NCBI]

Genbank nucleotide accession

OR846721.1 [NCBI]

CDS location

range 46652 -> 47197
strand -

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)