Phage RBP Database

Genbank accession

YP_009133645.1 [GenBank]

Protein name

baseplate wedge tail fiber protein connector

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,93

Seq2Symm

C3 confidence 0,531

C3	0,531
C1	0,512
I	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTKQSLGLGTTANDNTGDTLRVGGDKINDNFDEIYSAFGNGTNLTLNVSNAATNQVLKYNGTSFVPGDLGLLTTALDVNNNNITSSSNNNISLVPNGTGDLRIVAGSITSTFDGDDGTVDFPTKIRYINEYTSLGVAPASATYTGYFFTVDGDDNPYVNINVTAGGVGDTAAKIATEYSSIDFLNDVDTTTVAPANDQVLKWSASSSKWIPQDDQSGLTALNLFQTVTADTGSTTANSGTDTLIIAGGTDIDTAIVGDTVTVNFSGVVPSTLDTLSNVDLSSLVQGDSFYYNGTNWVRSQSPLTWFELGSNGFNHFTFSGAGFPVTQDDPTIYVYRGFTYAFDNSSNGASHPLRIQSTTGLSGNPYTVGQSGNGTSVLYWTVPMDAPTTLYYQCTVHAAMAGTIVVVN

Physico‐chemical properties

protein length:	408 AA
molecular weight:	42919,21930 Da
isoelectric point:	4,05003
aromaticity:	0,09804
hydropathy:	-0,14191

Domain architecture

YP_009133645.1

1 408 aa

ATT 1–60 · STR 61–95 · STR 307–407 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036240
STR

IPR036240 IPR008972

IPR008987
ATT

IPR008987 IPR008972

G3DSA:1.20.5.960
Unmapped

G3DSA:1.20.5.960

YP_009133645.1

1408 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0210
STR

DC_0210

YP_009133645.1

1408 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	95	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	3	60	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	13	44	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR008972	STR	IPR008972	307	407	Merged direct domain	Cupredoxin	Central	Low	Positional only	3 proteins / 3 hits
IPR008972	STR	IPR008972	329	407	Merged direct domain	Cupredoxin	Central	Low	Positional only	3 proteins / 3 hits

Proteins with similar domain architecture

Phage

Synechococcus phage ACG-2014g [NCBI] · taxon 1493512

Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Macariavirus Macariavirus tuscon14g

Host

Synechococcus sp. WH 7803 [NCBI] · taxon 32051

Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. WH 7803

Genbank protein accession

YP_009133645.1 [NCBI]

Genbank nucleotide accession

NC_026924 [NCBI]

CDS location

range 73164 -> 74390
strand +

CDS

ATGACAAAACAATCACTTGGTTTAGGTACTACAGCAAATGACAACACGGGGGATACCCTTCGTGTTGGTGGTGATAAAATTAATGACAACTTTGATGAAATTTATTCTGCTTTTGGTAACGGAACTAATCTAACCCTTAACGTTAGCAACGCTGCAACAAACCAAGTGTTGAAGTATAACGGAACCAGTTTTGTACCTGGAGATCTAGGTCTCCTAACAACAGCATTAGATGTAAATAATAATAATATTACATCATCAAGTAACAATAACATTTCTTTAGTTCCAAATGGTACTGGAGATTTGAGGATTGTTGCAGGTTCTATCACTTCAACCTTTGATGGTGATGATGGGACCGTAGATTTTCCTACAAAAATTAGATATATCAATGAATACACCAGTCTTGGTGTAGCTCCTGCATCAGCAACATATACTGGATATTTTTTCACTGTTGACGGAGATGACAACCCCTATGTAAATATTAATGTAACTGCGGGTGGTGTTGGTGATACTGCAGCGAAGATAGCGACAGAATATTCGAGTATTGATTTTTTAAATGATGTTGACACTACTACAGTTGCACCTGCTAATGACCAGGTATTAAAGTGGAGTGCTTCTTCCAGTAAGTGGATTCCTCAAGACGACCAGTCTGGACTCACAGCATTAAATTTGTTCCAAACTGTTACTGCTGATACAGGTAGTACTACTGCAAACAGTGGAACTGATACTTTAATTATTGCGGGAGGCACTGATATTGATACAGCAATTGTTGGAGATACTGTAACAGTTAATTTTTCTGGAGTTGTTCCAAGTACATTAGATACTCTATCAAATGTTGATTTGAGTAGTCTGGTGCAAGGTGATAGTTTCTATTATAACGGCACAAATTGGGTTAGAAGTCAAAGTCCTTTAACTTGGTTTGAACTGGGTTCTAATGGATTTAATCACTTTACTTTTAGTGGTGCTGGATTTCCTGTAACACAAGATGACCCAACCATTTACGTTTATAGGGGATTCACTTACGCTTTTGACAATAGTTCAAATGGCGCAAGTCATCCATTGAGAATTCAATCAACAACAGGACTTTCTGGGAATCCATACACTGTTGGACAGTCTGGTAATGGTACTTCAGTTCTCTATTGGACTGTTCCTATGGATGCTCCTACAACACTGTATTATCAGTGTACCGTACACGCCGCCATGGCTGGCACTATCGTCGTAGTAAACTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)