Phage RBP Database

Genbank accession

QQO92123.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

Seq2Symm

C3 confidence 0,982

C3	0,982
I	0,010
C6	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MNPLDDFKLHIERLDSPGVSAIEITPSNSTPLVKVSRAIYIGGSGDLVVEMLGGQTPITFVGVSAGCVLPIRVTKVLESTSATNLVALY

Physico‐chemical properties

protein length:	89 AA
molecular weight:	9341,73440 Da
isoelectric point:	5,08239
aromaticity:	0,04494
hydropathy:	0,43483

Domain architecture

QQO92123.1

1 89 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR061180
Unmapped

IPR061180

QQO92123.1

189 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0304
STR

DC_0304

QQO92123.1

189 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR061180	Unmapped	-	5	89	InterPro	Spike base protein Rcc01079-like	-	-	-	-

Proteins with similar domain architecture

Phage

Flavobacterium phage vB_FspM_immuto_3-5A [NCBI] · taxon 2801478

Uroviricota Caudoviricetes Immutovirus Flavobacterium phage vB_FspM_immuto_3-5A

Host

Flavobacterium sp. LMO8 [NCBI] · taxon 2654244

Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. LMO8

Genbank protein accession

QQO92123.1 [NCBI]

Genbank nucleotide accession

MW353176.1 [NCBI]

CDS location

range 128547 -> 128816
strand +

CDS

ATGAACCCATTAGACGACTTCAAATTACATATTGAAAGACTTGACTCACCAGGAGTAAGTGCAATAGAAATAACACCAAGTAACTCAACTCCTTTAGTTAAAGTTTCAAGAGCAATTTATATCGGAGGATCAGGTGACCTTGTAGTAGAAATGCTAGGAGGACAGACTCCAATAACGTTTGTAGGAGTATCTGCAGGATGTGTACTTCCAATTAGAGTAACTAAGGTACTTGAATCTACATCTGCCACAAACTTAGTAGCACTTTATTAA

Title	Authors	Date	PMID	Source
Dynamics of Baltic Sea phages driven by environmental changes	Hoetzinger,M., Nilsson,E. and Holmfeldt,K.	—	34190387	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature