Protein

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Genbank accession
QYW06291.1 [GenBank]
Protein name
SGNH/GDSL hydrolase family protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,56
Seq2Symm
C3 confidence 0,939
C3 0,939
C2 0,060
C1 0,005
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MHPLRNGSQADVRPPSKPLSGVPGWFTESGDNNVPSYPGADWFNHNIAEFQNALAEMGIVFDPTKEDHLAKAFEYIKNEIDGKTIEINGAIIRNASILSRLNAIGGRLQQDGKTVVITGDSLSYNYQDYDTTFRNHAVDCFSGMKSWSFMLRDAIIKADPSFTFIEDQFITGQIDYLGEMSEVRFNAASAKQLLPFSGRVASFRMNVNDTIAPAISMSVYNDGESDSMYFLQLMHPNNLPDCMSCKVDIDGVEQISTLTNKSADTKFRGFDIRQIEITVPRDGERHELKFHTFTQASDTPDPAGQMTYNLIGVASKRTEVELTGSGGYSSSQLLAAWPDKVTQYQPDVLICIVGANDPYKGVSVETFKDNIRELNNLTKSSNEGCEILWLSTPYSGEAVVPNAIAQEYVDALRQVADELGDGFVDIVEFFKNIPTDIYRFDNIHFTKEGNQILARYIANLIGLGDQLKEIKSDYSLYKQQKTPNVAEVKPSVILLTGTVSSTNKVFKIERKSGLGNEVISAVATSPAVIQVTMKRRNNHYKSILVDKFFFGGKMFLCPIIQLTPTSKTFNFAVLNPDGTTITDGDWDTYASDFKFLIRYS
Physico‐chemical
properties
protein length:600 AA
molecular weight: 66786,51350 Da
isoelectric point:5,10269
aromaticity:0,10167
hydropathy:-0,28117

Domains

View on InterPro
Domain architecture
QYW06291.1
1 600 aa
STR 113–461 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QYW06291.1
1 600 aa
Domain Start End Length (AA) Confidence
N-terminal 1 108 108 0,9829
Central domain 109 307 200 0,3720
C-terminal 308 600 292 0,7851
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Shewanella phage vB_SspM_MuM16-2 [NCBI] · taxon 2866685
Uroviricota Caudoviricetes Shewanella phage vB_SspM_MuM16-2
Host
Shewanella sp. M16 [NCBI] · taxon 2830837
Pseudomonadota Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella Shewanella sp. M16

Coding sequence (CDS)

Genbank protein accession
QYW06291.1 [NCBI]
Genbank nucleotide accession
MZ568828 [NCBI]
CDS location
range 31900 -> 33702
strand +
CDS
ATGCATCCGTTACGCAATGGTTCACAAGCTGACGTTCGCCCACCATCTAAGCCATTAAGTGGTGTCCCTGGATGGTTTACTGAGTCAGGTGACAACAACGTCCCAAGCTATCCAGGTGCAGATTGGTTTAACCACAACATTGCTGAATTTCAGAATGCATTGGCTGAAATGGGCATAGTGTTTGATCCAACAAAAGAAGATCATTTAGCTAAAGCATTTGAGTATATAAAGAATGAAATTGATGGTAAAACAATCGAGATCAATGGTGCAATAATAAGAAATGCTAGCATTTTATCTAGACTAAATGCGATTGGCGGGCGATTACAACAAGATGGGAAGACTGTTGTAATCACTGGGGACAGCTTATCTTACAACTATCAAGATTACGATACTACGTTCCGTAATCATGCAGTAGATTGTTTTTCAGGCATGAAATCGTGGTCATTCATGCTAAGAGACGCAATTATAAAAGCAGACCCCAGCTTTACTTTTATAGAAGATCAATTCATCACGGGCCAAATTGATTATCTTGGTGAGATGTCAGAAGTCAGGTTCAATGCGGCATCGGCAAAGCAGCTGTTACCATTTAGCGGCCGCGTCGCATCATTTAGAATGAATGTGAATGACACGATAGCCCCAGCGATTAGCATGTCAGTTTATAATGACGGTGAATCTGACTCTATGTATTTTTTGCAACTCATGCATCCTAACAATCTCCCAGATTGCATGAGTTGCAAAGTAGATATCGACGGAGTCGAACAGATATCCACACTCACGAACAAATCTGCGGATACAAAATTCCGAGGTTTTGACATCAGACAAATTGAGATTACTGTTCCTCGTGACGGTGAGCGACACGAGCTAAAATTTCATACATTTACACAAGCATCTGATACACCTGACCCTGCGGGACAAATGACTTACAATCTGATCGGAGTCGCATCCAAACGAACGGAAGTGGAACTGACGGGTTCTGGGGGGTATTCATCTTCACAGCTGCTCGCTGCGTGGCCGGATAAAGTTACACAATATCAGCCAGACGTTTTAATCTGTATTGTTGGGGCGAATGACCCATACAAAGGTGTGAGCGTAGAAACATTTAAAGATAATATTAGAGAACTAAATAATTTAACAAAATCATCAAATGAAGGATGCGAAATACTTTGGTTATCAACACCTTATAGTGGAGAGGCTGTGGTGCCAAATGCGATAGCTCAAGAATATGTTGATGCGTTGCGACAAGTAGCAGATGAACTTGGAGATGGGTTTGTTGATATAGTTGAGTTCTTCAAAAACATTCCAACTGATATTTACAGGTTCGACAACATACATTTTACAAAAGAGGGTAATCAAATCCTAGCTAGATATATTGCTAATTTAATCGGGCTTGGTGATCAACTAAAAGAGATTAAATCTGATTACTCATTATATAAGCAGCAAAAAACACCAAACGTTGCTGAAGTGAAACCATCAGTAATTTTACTCACAGGAACAGTTTCATCAACAAATAAAGTTTTCAAGATAGAGCGCAAGTCTGGACTAGGAAACGAGGTCATATCTGCTGTTGCAACGTCACCAGCAGTCATTCAAGTCACAATGAAGCGACGGAACAATCACTACAAGTCTATCCTGGTCGATAAATTCTTTTTTGGTGGGAAAATGTTTCTATGTCCAATCATACAACTAACTCCAACGTCAAAAACATTCAACTTTGCAGTGCTAAACCCAGACGGTACCACCATAACAGATGGTGACTGGGATACTTACGCTAGTGATTTCAAGTTCCTAATCAGATATAGCTAA

Genome Context

Tertiary structure

QYW06291.1
ESMFold structure
Source ESMFold
pLDDT 71.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Identification, Characterization, and Genomic Analysis of Novel Shewanella Virulent Phage from a Gold Mine Bujak,K., Decewicz,P. and Radlinska,M. 2020-09-13 32933193 GenBank