Protein

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Genbank accession
YP_009594075.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MCKQQNCGCNDPCKPVICVSYVEDSCADRKLATSNTTHPTGYDNVTLITPEVNQISAYKEHLEFVNSPELLSNIPKHSVLRFSQKFLDIISNLFKGRNVGTGAKVYKGSTVLGLDTFQDFKTLKNSSSVDVNNDTNEIIFSVNENWLEAQMPIIPPPIVPDYPVIDGISVGTGVPIYDGITNKKIKISSLKSNTLNISKLLDGTVKIDSINTEFDYLKAYYINSNYVSTLLSPADGSVSRPFPTWDEARTKMIGTGTILNPENQNVTFILQTNASTALNPTINTLSIKFMNTSLTYTGNDVYMIDSEVLYPLIPKDTNNEITESITLNIFGVGSLHRTTVGGYIRSVGAKRGSSITTNNPNNIIFRIGENENDTLYLEEFVNYPNSIWEGDVLKRDGVTLLGNDYNPPIVLKWTTQVNPTNPLVYVKNNSFGSFTYPVLGKGSLYIQTFVNTGLHVENTNINFNKLTILPYSYRISVVQGNTFVPSFPGVYEPKNAPAIYSKDVQWFLNSLYNINIGTFTFNGFDKFFKIEGFFTFHGSTNYDTSHYIKTFADLSTTTQNSFQINGLDKNSNLNSNINYLINSNIVGDFNLFIPNSSIRTIRNISQNPTTNIIPITKGTLSSINDKPYLSGINDYADDAAAMSTGLLQNALYFNTTNNVLDKV
Physico‐chemical
properties
protein length:663 AA
molecular weight: 73608,96470 Da
isoelectric point:5,52477
aromaticity:0,10558
hydropathy:-0,22172

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009594075.1
1 663
Domain Start End Length (AA) Confidence
N-terminal 1 260 260 0,8741
Central domain 261 613 354 0,9309
C-terminal 614 663 49 0,8947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-260
Central
261-613
C-terminal
614-663

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FpV4
[NCBI] 		1740108 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009594075.1 [NCBI]
Genbank nucleotide accession
NC_041872 [NCBI]
CDS location
range 16096 -> 18087
strand +
CDS
ATGTGTAAACAACAAAATTGTGGGTGTAATGACCCATGTAAACCTGTAATATGTGTTTCTTATGTAGAAGATTCTTGTGCTGATAGAAAATTAGCTACAAGTAATACTACACATCCCACAGGTTATGATAATGTAACTTTAATAACACCAGAGGTAAATCAAATATCTGCATACAAAGAACATTTAGAATTTGTAAATTCACCTGAACTTTTAAGTAATATTCCTAAACATTCTGTATTAAGATTTTCACAAAAATTTCTTGATATTATTTCTAATTTATTTAAAGGTAGAAATGTAGGTACTGGTGCTAAGGTATATAAAGGAAGTACAGTATTAGGACTAGATACATTTCAAGATTTTAAAACTCTTAAAAATTCTAGTTCAGTAGATGTAAATAATGATACTAATGAAATAATTTTTTCTGTAAATGAGAATTGGTTAGAAGCGCAAATGCCTATTATACCACCACCTATTGTACCAGATTATCCAGTTATAGATGGTATATCTGTTGGTACAGGTGTACCAATATATGATGGAATAACTAATAAAAAAATTAAAATATCATCATTAAAATCAAATACTTTAAACATTTCTAAACTCCTTGATGGTACAGTAAAAATAGATAGTATAAATACAGAGTTTGATTATCTTAAAGCATATTACATAAATAGTAATTATGTTTCAACTTTATTATCACCTGCTGATGGTTCTGTTAGTAGACCTTTTCCAACATGGGATGAAGCTAGAACAAAAATGATTGGTACAGGTACTATTTTAAATCCTGAAAATCAAAATGTAACATTTATATTACAAACTAATGCTTCAACAGCTTTAAATCCTACTATAAATACATTAAGTATTAAGTTTATGAATACCTCATTAACTTATACAGGAAATGATGTCTATATGATAGATTCAGAAGTATTATATCCATTAATACCTAAAGATACTAACAATGAAATTACTGAATCAATTACACTCAATATTTTTGGAGTTGGTTCTTTACATAGAACTACAGTTGGTGGTTATATAAGAAGTGTTGGAGCTAAAAGAGGTTCAAGTATAACAACAAATAACCCTAATAATATTATCTTTAGAATAGGTGAAAATGAAAATGATACTTTATATTTAGAAGAGTTTGTGAATTATCCAAACTCAATATGGGAAGGAGATGTTTTAAAACGAGATGGAGTAACTTTACTTGGTAATGATTATAATCCACCAATAGTTTTAAAATGGACAACTCAAGTAAATCCTACAAACCCATTAGTATATGTTAAAAACAATAGTTTTGGTAGTTTTACTTATCCTGTGCTAGGGAAAGGTAGTTTATATATACAAACTTTTGTAAACACTGGATTACATGTTGAAAATACAAATATAAATTTCAATAAACTGACTATACTTCCTTATTCTTATAGGATTTCTGTTGTGCAAGGTAACACTTTTGTACCTAGTTTTCCTGGAGTATATGAACCAAAAAATGCTCCAGCTATCTATTCAAAAGATGTTCAATGGTTTTTAAACTCTTTATATAATATAAATATTGGTACTTTTACATTTAATGGTTTTGATAAATTTTTTAAAATAGAAGGTTTTTTCACTTTTCATGGTTCAACTAATTATGATACAAGTCATTATATAAAAACATTTGCTGATTTAAGTACAACCACACAAAATAGTTTTCAAATAAATGGTTTAGATAAAAATTCAAATCTTAATTCAAATATTAATTATTTAATAAATAGTAATATAGTTGGAGATTTTAACCTATTTATACCTAATTCTAGTATAAGAACTATAAGAAACATTAGTCAAAATCCAACTACTAATATTATTCCAATTACAAAAGGTACTTTATCCTCTATAAATGATAAACCCTATTTGTCAGGAATAAATGATTATGCAGATGATGCAGCAGCAATGTCAACAGGACTACTACAAAATGCATTATACTTTAATACAACAAACAATGTTTTAGATAAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
647b350e0943548903de330aa601f7bd24fe6f9a5a5439281a6a3a32e713d3af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Molecular aspects and genomic diversity of bacteriophages-specific to fish pathogen Flavobacterium psychrophilum Castillo,D. Sr., Christiansen,R. and Middelboe,M. 2016-12 — GenBank