Protein

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Genbank accession
YP_009594075.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,88
Seq2Symm
C3 confidence 0,161
C3 0,161
C1 0,035
C2 0,030
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MCKQQNCGCNDPCKPVICVSYVEDSCADRKLATSNTTHPTGYDNVTLITPEVNQISAYKEHLEFVNSPELLSNIPKHSVLRFSQKFLDIISNLFKGRNVGTGAKVYKGSTVLGLDTFQDFKTLKNSSSVDVNNDTNEIIFSVNENWLEAQMPIIPPPIVPDYPVIDGISVGTGVPIYDGITNKKIKISSLKSNTLNISKLLDGTVKIDSINTEFDYLKAYYINSNYVSTLLSPADGSVSRPFPTWDEARTKMIGTGTILNPENQNVTFILQTNASTALNPTINTLSIKFMNTSLTYTGNDVYMIDSEVLYPLIPKDTNNEITESITLNIFGVGSLHRTTVGGYIRSVGAKRGSSITTNNPNNIIFRIGENENDTLYLEEFVNYPNSIWEGDVLKRDGVTLLGNDYNPPIVLKWTTQVNPTNPLVYVKNNSFGSFTYPVLGKGSLYIQTFVNTGLHVENTNINFNKLTILPYSYRISVVQGNTFVPSFPGVYEPKNAPAIYSKDVQWFLNSLYNINIGTFTFNGFDKFFKIEGFFTFHGSTNYDTSHYIKTFADLSTTTQNSFQINGLDKNSNLNSNINYLINSNIVGDFNLFIPNSSIRTIRNISQNPTTNIIPITKGTLSSINDKPYLSGINDYADDAAAMSTGLLQNALYFNTTNNVLDKV
Physico‐chemical
properties
protein length:663 AA
molecular weight: 73608,96470 Da
isoelectric point:5,52477
aromaticity:0,10558
hydropathy:-0,22172

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009594075.1
1 663 aa
Domain Start End Length (AA) Confidence
N-terminal 1 260 260 0,8741
Central domain 261 613 354 0,9309
C-terminal 614 663 49 0,8947
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Flavobacterium phage FpV4 [NCBI] · taxon 1740108
Uroviricota Caudoviricetes Fipvunavirus Fipvunavirus Fpv4
Host
Flavobacterium psychrophilum [NCBI] · taxon 96345
Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium psychrophilum

Coding sequence (CDS)

Genbank protein accession
YP_009594075.1 [NCBI]
Genbank nucleotide accession
NC_041872 [NCBI]
CDS location
range 16096 -> 18087
strand +
CDS
ATGTGTAAACAACAAAATTGTGGGTGTAATGACCCATGTAAACCTGTAATATGTGTTTCTTATGTAGAAGATTCTTGTGCTGATAGAAAATTAGCTACAAGTAATACTACACATCCCACAGGTTATGATAATGTAACTTTAATAACACCAGAGGTAAATCAAATATCTGCATACAAAGAACATTTAGAATTTGTAAATTCACCTGAACTTTTAAGTAATATTCCTAAACATTCTGTATTAAGATTTTCACAAAAATTTCTTGATATTATTTCTAATTTATTTAAAGGTAGAAATGTAGGTACTGGTGCTAAGGTATATAAAGGAAGTACAGTATTAGGACTAGATACATTTCAAGATTTTAAAACTCTTAAAAATTCTAGTTCAGTAGATGTAAATAATGATACTAATGAAATAATTTTTTCTGTAAATGAGAATTGGTTAGAAGCGCAAATGCCTATTATACCACCACCTATTGTACCAGATTATCCAGTTATAGATGGTATATCTGTTGGTACAGGTGTACCAATATATGATGGAATAACTAATAAAAAAATTAAAATATCATCATTAAAATCAAATACTTTAAACATTTCTAAACTCCTTGATGGTACAGTAAAAATAGATAGTATAAATACAGAGTTTGATTATCTTAAAGCATATTACATAAATAGTAATTATGTTTCAACTTTATTATCACCTGCTGATGGTTCTGTTAGTAGACCTTTTCCAACATGGGATGAAGCTAGAACAAAAATGATTGGTACAGGTACTATTTTAAATCCTGAAAATCAAAATGTAACATTTATATTACAAACTAATGCTTCAACAGCTTTAAATCCTACTATAAATACATTAAGTATTAAGTTTATGAATACCTCATTAACTTATACAGGAAATGATGTCTATATGATAGATTCAGAAGTATTATATCCATTAATACCTAAAGATACTAACAATGAAATTACTGAATCAATTACACTCAATATTTTTGGAGTTGGTTCTTTACATAGAACTACAGTTGGTGGTTATATAAGAAGTGTTGGAGCTAAAAGAGGTTCAAGTATAACAACAAATAACCCTAATAATATTATCTTTAGAATAGGTGAAAATGAAAATGATACTTTATATTTAGAAGAGTTTGTGAATTATCCAAACTCAATATGGGAAGGAGATGTTTTAAAACGAGATGGAGTAACTTTACTTGGTAATGATTATAATCCACCAATAGTTTTAAAATGGACAACTCAAGTAAATCCTACAAACCCATTAGTATATGTTAAAAACAATAGTTTTGGTAGTTTTACTTATCCTGTGCTAGGGAAAGGTAGTTTATATATACAAACTTTTGTAAACACTGGATTACATGTTGAAAATACAAATATAAATTTCAATAAACTGACTATACTTCCTTATTCTTATAGGATTTCTGTTGTGCAAGGTAACACTTTTGTACCTAGTTTTCCTGGAGTATATGAACCAAAAAATGCTCCAGCTATCTATTCAAAAGATGTTCAATGGTTTTTAAACTCTTTATATAATATAAATATTGGTACTTTTACATTTAATGGTTTTGATAAATTTTTTAAAATAGAAGGTTTTTTCACTTTTCATGGTTCAACTAATTATGATACAAGTCATTATATAAAAACATTTGCTGATTTAAGTACAACCACACAAAATAGTTTTCAAATAAATGGTTTAGATAAAAATTCAAATCTTAATTCAAATATTAATTATTTAATAAATAGTAATATAGTTGGAGATTTTAACCTATTTATACCTAATTCTAGTATAAGAACTATAAGAAACATTAGTCAAAATCCAACTACTAATATTATTCCAATTACAAAAGGTACTTTATCCTCTATAAATGATAAACCCTATTTGTCAGGAATAAATGATTATGCAGATGATGCAGCAGCAATGTCAACAGGACTACTACAAAATGCATTATACTTTAATACAACAAACAATGTTTTAGATAAAGTTTAA

Genome Context

Tertiary structure

YP_009594075.1
ESMFold structure
Source ESMFold
pLDDT 37.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Molecular aspects and genomic diversity of bacteriophages-specific to fish pathogen Flavobacterium psychrophilum Castillo,D. Sr., Christiansen,R. and Middelboe,M. 2016-12 — GenBank