Phage RBP Database

Genbank accession

UVD41657.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Seq2Symm

C3 confidence 0,985

C3	0,985
C2	0,006
C4	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MQILVNKRNEIISYAIIGGFEEGIDIENLPENFSQVFRPKVFKYSNGEIVFNEDYSEEKDDLHQQIDSEEQNTVASDDILRKMVASIQKQVVQSTKLSMQVNKQNALMAKQLVTLNKKLEEVKGETENA

Physico‐chemical properties

protein length:	129 AA
molecular weight:	14766,48210 Da
isoelectric point:	4,76688
aromaticity:	0,06202
hydropathy:	-0,57597

Domain architecture

UVD41657.1

1 129 aa

STR 1–59 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR021358
STR

IPR021358 Coil

IPR021358
STR

IPR021358

Coil
Unmapped

Coil

UVD41657.1

1129 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0472
STR

DC_0472

UVD41657.1

1129 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR021358	STR	DC_0822	1	59	InterPro cluster	Protein of unknown function DUF2977	Central	Low	Positional only	74 proteins / 74 hits
IPR021358	STR	DC_0822	1	55	InterPro cluster	Protein of unknown function DUF2977	Central	Low	Positional only	74 proteins / 74 hits
Coil	Unmapped	-	52	72	Coils	Coil	-	-	-	-
Coil	Unmapped	-	105	125	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Staphylococcus phage A12-4PHSA25 [NCBI] · taxon 2961990

Uroviricota Caudoviricetes Triavirus Staphylococcus phage A12-4PHSA25

Host

Staphylococcus aureus strain SA25 [NCBI] · taxon 643673

Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae Paenochrobactrum Paenochrobactrum gallinarii

Genbank protein accession

UVD41657.1 [NCBI]

Genbank nucleotide accession

ON856258.1 [NCBI]

CDS location

range 1028 -> 1417
strand +

CDS

ATGCAAATATTAGTTAACAAGCGTAATGAGATAATTTCATACGCTATCATTGGTGGCTTTGAAGAAGGTATTGATATTGAAAATTTACCAGAAAATTTCTCTCAAGTTTTTAGACCTAAAGTCTTTAAATATTCAAATGGGGAAATAGTTTTTAACGAAGATTATTCAGAAGAAAAAGATGACTTGCATCAACAGATTGACAGTGAAGAACAAAACACAGTCGCTTCTGATGACATCTTACGAAAAATGGTTGCTAGTATACAGAAACAAGTTGTTCAAAGTACAAAGTTATCGATGCAAGTTAATAAGCAAAATGCACTAATGGCAAAACAACTTGTGACACTTAATAAAAAATTAGAAGAGGTTAAAGGAGAGACGGAAAATGCTTAA

Title	Authors	Date	PMID	Source
A virulence bacteriophage derived from a temperate one helps to control biofilm formation and skin infections of methicillin-resistant Staphylococcus aureus in mouse models	Peng,Z.	2023-02	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature