Protein

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Genbank accession
WJE88088.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFGEWLPDQPDHLNPGVVTATNVIPSASGYKPFPELITYSNSATATIRGIFAAKDNDGNVDLFAGDSGKLYKFTPSTNNLTDVSKSGTPAYDLTGDERWRFVQFGEYVIAAGGVGEELQKWQLGTDTAFSNLAGSPPNADFIAVVRDFIWTANIDEGSGRIPYRTRWSGFNDIDGWTTGTDQSDFQDLPDSGAITGMVGGEYCTILCERAIFRATYTGPPLIWQFDRVESQVGCRLPGSVCNYGSLTFFLADNGFHAFDGQKVTPIGNEKVDKFFDKDFNSNYKNNVSAAVDPLNQIAVWSYPSTASTNGDCDRLLIYNYALNRWSLVNATTNFIAPFFSSGYTLDNLDNISATLDGLTTVLDSQLFRGGEYFFGGAVGDKLATFTGDPLPATIETGEVGIAKGKHGIVTRVYPYFEDGTVTMEVGTRNTPTSAVTFTSPVAMNVDGFCPFRAQGRYHRTRMNLTGNWSNAQGLDVDAREVGRR
Physico‐chemical
properties
protein length:486 AA
molecular weight: 53017,18150 Da
isoelectric point:4,65400
aromaticity:0,12346
hydropathy:-0,26934

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJE88088.1
1 486
Domain Start End Length (AA) Confidence
N-terminal 1 367 367 0,5362
Central domain 368 475 109 0,1794
C-terminal 476 486 10 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-367
Central
368-475
C-terminal
476-486

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage C72C1
[NCBI] 		3053736 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJE88088.1 [NCBI]
Genbank nucleotide accession
OQ984150 [NCBI]
CDS location
range 4953 -> 6413
strand -
CDS
ATGATACCTTTCGGAGAATGGCTACCTGACCAGCCTGACCACCTGAACCCCGGCGTGGTGACAGCAACAAATGTGATTCCGTCTGCCTCTGGCTACAAGCCGTTCCCAGAGCTTATCACTTACAGCAATTCTGCAACCGCAACAATTCGCGGCATCTTTGCGGCCAAAGACAATGACGGCAATGTTGACTTGTTCGCTGGCGATAGCGGCAAGCTGTACAAGTTCACACCGTCAACAAACAATCTCACCGATGTCAGTAAGTCTGGCACCCCTGCGTATGATTTGACCGGAGATGAACGCTGGCGGTTTGTGCAGTTTGGCGAGTATGTTATCGCGGCTGGTGGAGTTGGTGAGGAGTTGCAGAAGTGGCAGTTAGGCACTGACACAGCCTTTTCAAACCTAGCCGGTTCGCCGCCAAACGCTGACTTCATAGCTGTGGTGCGGGACTTTATTTGGACGGCCAACATTGATGAGGGGTCGGGCCGGATACCATACCGCACACGCTGGTCTGGCTTCAACGACATTGACGGATGGACAACTGGCACAGACCAGTCAGACTTTCAGGACTTGCCGGACAGTGGTGCAATCACTGGCATGGTCGGCGGTGAATACTGCACCATTCTGTGTGAACGCGCTATCTTCCGGGCCACCTATACAGGGCCACCGCTTATCTGGCAGTTTGACCGGGTTGAATCACAAGTTGGCTGTCGTCTGCCCGGCTCTGTGTGCAACTATGGCTCACTGACGTTCTTCTTGGCGGATAACGGATTCCATGCTTTTGACGGCCAGAAAGTCACGCCGATTGGCAACGAAAAGGTGGATAAGTTCTTCGACAAAGACTTTAACAGCAATTACAAGAACAACGTGTCTGCCGCTGTTGACCCGCTGAACCAGATTGCTGTCTGGTCATACCCGTCCACAGCAAGCACGAACGGAGACTGTGACCGGCTTCTGATATACAACTACGCGCTGAACCGCTGGTCGCTTGTAAATGCAACAACCAACTTCATCGCGCCGTTCTTCAGTTCTGGGTATACGTTGGACAATCTTGACAACATCTCAGCCACCCTTGATGGCCTGACAACCGTGTTGGACAGTCAGTTGTTCCGGGGCGGCGAGTACTTCTTCGGCGGTGCTGTGGGAGACAAGCTGGCCACCTTTACAGGCGACCCCCTACCGGCAACCATTGAAACTGGCGAGGTCGGCATTGCTAAGGGCAAACACGGTATTGTGACCCGCGTTTATCCGTATTTTGAGGATGGCACTGTGACGATGGAAGTCGGCACCCGTAACACACCGACATCTGCTGTTACCTTTACAAGCCCGGTTGCTATGAATGTGGACGGGTTCTGTCCGTTCCGCGCCCAGGGCCGGTATCACCGCACCCGCATGAACCTGACCGGCAACTGGTCAAACGCGCAGGGTTTGGATGTGGATGCCAGAGAGGTGGGGCGTAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
69c06e1c2d3f96190de2178dd1469f41a2575601503d6d28f404046c03fb5087
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9435
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Hecatomb: An End-to-End Research Platform for Viral Metagenomics Roach,M.J. 2022 — GenBank