Phage RBP Database

Genbank accession

UGV21633.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,74

TF

Evidence RBPdetect2

Probability 0,88

Seq2Symm

C3 confidence 0,998

C3	0,998
C1	0,016
C6	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADMTQFEQAVDQVVEDSERLHKVVNGTASETVVTEDGSTIPTVRKALLDNLFFKTPPIPWTAGSQATVFNQLYAFTGANGVQWWYAPGATASAPVTLPANPSTSVNWRLYNDAAAMASIYAPINSPVLTGNPQAPTPAANSNSTTIATTAFVTTAVANALSSISGGSVTFANVTVSGATSLNNLTVTGTTTLNGPVNADNSTGRFQNLILTKQASSLTFVYTDAGNPTFLKTRLDPYAAQTHSLKTDIIVNGTVASDDTTMSLTGIGNNVFDYVYIRGNSEKDTASPRLKVTGTTEVENLRITGTVTGLSLSVDGMDIAPNSVTTADGVTVGGDLQVNGNFNVDNISTETMTVNNTLTVNQGADLKGATVGGAFTAGGLVTMTSGFSTPVNGTVGGTLQVSGVSDLTGGFTSGANSSVTGNLNVSGDVDMNGSSGTTTVNNLVIRGTVTGLTVDLTGQSINVASLTATGSVTAANLTVQDSADLPAANIGFLTLVAEEVESSTASWTPSGESNIYNVLVDADLTIGKWPSPPNAFSAVIYLTQDATGGHTVTLDPNYLVLNSETINQTAGSVTILQLTYNGVADDAGEQGVIDTVIVRRP

Physico‐chemical properties

protein length:	601 AA
molecular weight:	61722,46240 Da
isoelectric point:	4,17814
aromaticity:	0,05824
hydropathy:	0,03527

Domain architecture

UGV21633.1

1 601 aa

ATT 5–111 · RBD 507–584 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058969
ATT

IPR058969 IPR058970

UGV21633.1

1601 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0194
STR

DC_0194

UGV21633.1

1601 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058969	ATT	DC_0606	5	111	InterPro cluster	Putative phage tail fibre, N-terminal domain	N-terminal	High	Text match	229 proteins / 229 hits
IPR058970	RBD	DC_0552	507	584	InterPro cluster	Putative phage tail fibre, C-terminal domain	C-terminal	Low	Positional only	292 proteins / 292 hits

Proteins with similar domain architecture

Phage

Cronobacter phage EspYZU08 [NCBI] · taxon 2836140

Uroviricota Caudoviricetes Seunavirus Cronobacter phage EspYZU08

Host

Cronobacter sakazakii [NCBI] · taxon 28141

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Cronobacter Cronobacter sakazakii

Genbank protein accession

UGV21633.1 [NCBI]

Genbank nucleotide accession

MW882934.1 [NCBI]

CDS location

range 41657 -> 43627
strand -

CDS

GTGGCAGACATGACTCAATTTGAACAGGCTGTCGATCAGGTCGTTGAAGACTCTGAACGCCTACACAAAGTTGTCAACGGAACGGCCTCCGAGACTGTTGTTACTGAAGATGGTAGCACCATTCCAACCGTTCGTAAAGCACTTCTTGACAACCTGTTCTTCAAGACCCCGCCTATTCCTTGGACTGCGGGATCTCAAGCAACAGTATTCAACCAGCTTTATGCCTTCACCGGGGCAAACGGTGTACAGTGGTGGTATGCGCCGGGTGCTACGGCCTCTGCTCCTGTAACTTTACCAGCAAACCCTTCTACAAGTGTGAACTGGAGACTTTACAACGACGCAGCAGCGATGGCATCCATCTACGCTCCGATCAACAGTCCGGTGCTGACAGGTAACCCGCAGGCACCTACACCTGCTGCGAATAGTAACAGCACAACCATTGCGACCACAGCTTTTGTGACCACAGCGGTAGCTAATGCTCTGTCAAGTATTTCTGGTGGTAGCGTAACCTTTGCAAACGTAACCGTTTCTGGTGCGACTTCTCTGAACAACCTGACAGTTACAGGAACAACTACCCTTAACGGGCCAGTGAATGCTGACAACTCAACTGGTAGATTCCAGAACCTGATCCTAACCAAGCAGGCATCAAGTCTAACTTTCGTTTACACTGACGCAGGCAATCCTACGTTCCTCAAGACGAGATTAGATCCTTATGCGGCTCAGACACACAGCCTGAAGACAGACATCATTGTTAACGGAACTGTGGCTTCTGATGATACTACCATGTCCTTGACTGGTATTGGTAATAACGTTTTTGATTATGTTTACATCCGTGGTAACTCTGAGAAAGACACGGCCTCCCCACGACTGAAGGTTACGGGAACAACAGAGGTTGAAAACCTGCGTATTACAGGAACTGTGACAGGTCTCAGCCTAAGTGTTGACGGTATGGACATTGCCCCTAACTCCGTAACAACGGCAGATGGGGTGACAGTTGGTGGCGACCTCCAGGTCAATGGTAACTTCAACGTTGATAACATCTCTACGGAAACCATGACAGTCAATAATACTTTGACAGTTAATCAGGGTGCTGACCTGAAAGGTGCAACGGTCGGTGGTGCGTTTACCGCAGGTGGTCTGGTGACAATGACATCTGGATTCTCTACCCCCGTAAATGGAACAGTGGGAGGGACGCTCCAAGTGTCTGGTGTCTCCGATCTGACAGGTGGGTTCACTTCCGGTGCCAACTCTTCTGTAACAGGAAACCTGAACGTCAGCGGCGACGTTGACATGAACGGATCTTCTGGTACTACCACTGTCAACAACCTCGTTATCAGAGGGACTGTTACAGGTCTGACGGTTGATTTAACTGGTCAATCCATTAACGTTGCATCCTTGACAGCGACAGGTTCTGTAACCGCTGCAAACCTGACAGTTCAAGATTCGGCGGATTTGCCTGCTGCCAATATTGGATTCCTAACCTTGGTTGCTGAAGAAGTAGAAAGCTCCACAGCTTCATGGACACCAAGCGGGGAGTCGAACATTTACAATGTCTTGGTAGATGCAGACCTTACTATTGGTAAATGGCCTAGCCCTCCAAACGCATTCTCTGCGGTTATTTATCTTACCCAAGATGCAACTGGAGGACACACCGTTACTCTCGACCCGAACTACTTGGTTCTGAACAGCGAGACAATTAACCAAACAGCAGGTTCTGTGACTATTCTGCAATTGACCTATAACGGTGTTGCAGATGATGCAGGTGAACAAGGTGTTATCGACACAGTTATTGTCCGTCGCCCATAA

Title	Authors	Date	PMID	Source
Isolation and characterization of broad host-range of bacteriophages infecting Cronobacter sakazakii and its biocontrol potential in dairy products	Li,H., Yang,X.-J., Zhu,X.-Y., Gao,L., Rao,S.-Q., Yuan,L. and Yang,Z.-Q.	2021	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature