Protein

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Genbank accession
UGV21633.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADMTQFEQAVDQVVEDSERLHKVVNGTASETVVTEDGSTIPTVRKALLDNLFFKTPPIPWTAGSQATVFNQLYAFTGANGVQWWYAPGATASAPVTLPANPSTSVNWRLYNDAAAMASIYAPINSPVLTGNPQAPTPAANSNSTTIATTAFVTTAVANALSSISGGSVTFANVTVSGATSLNNLTVTGTTTLNGPVNADNSTGRFQNLILTKQASSLTFVYTDAGNPTFLKTRLDPYAAQTHSLKTDIIVNGTVASDDTTMSLTGIGNNVFDYVYIRGNSEKDTASPRLKVTGTTEVENLRITGTVTGLSLSVDGMDIAPNSVTTADGVTVGGDLQVNGNFNVDNISTETMTVNNTLTVNQGADLKGATVGGAFTAGGLVTMTSGFSTPVNGTVGGTLQVSGVSDLTGGFTSGANSSVTGNLNVSGDVDMNGSSGTTTVNNLVIRGTVTGLTVDLTGQSINVASLTATGSVTAANLTVQDSADLPAANIGFLTLVAEEVESSTASWTPSGESNIYNVLVDADLTIGKWPSPPNAFSAVIYLTQDATGGHTVTLDPNYLVLNSETINQTAGSVTILQLTYNGVADDAGEQGVIDTVIVRRP
Physico‐chemical
properties
protein length:601 AA
molecular weight: 61722,46240 Da
isoelectric point:4,17814
aromaticity:0,05824
hydropathy:0,03527

Domains

Domains [InterPro]
DC_0194
STR
1–599
DC_0194
IPR058969
ATT
5–111
IPR058969 IPR058970
UGV21633.1
1 601
Architecture
ATT
STR
ATT 1-111 | STR 112-599 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage EspYZU08
[NCBI] 		2836140 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGV21633.1 [NCBI]
Genbank nucleotide accession
MW882934.1 [NCBI]
CDS location
range 41657 -> 43627
strand -
CDS
GTGGCAGACATGACTCAATTTGAACAGGCTGTCGATCAGGTCGTTGAAGACTCTGAACGCCTACACAAAGTTGTCAACGGAACGGCCTCCGAGACTGTTGTTACTGAAGATGGTAGCACCATTCCAACCGTTCGTAAAGCACTTCTTGACAACCTGTTCTTCAAGACCCCGCCTATTCCTTGGACTGCGGGATCTCAAGCAACAGTATTCAACCAGCTTTATGCCTTCACCGGGGCAAACGGTGTACAGTGGTGGTATGCGCCGGGTGCTACGGCCTCTGCTCCTGTAACTTTACCAGCAAACCCTTCTACAAGTGTGAACTGGAGACTTTACAACGACGCAGCAGCGATGGCATCCATCTACGCTCCGATCAACAGTCCGGTGCTGACAGGTAACCCGCAGGCACCTACACCTGCTGCGAATAGTAACAGCACAACCATTGCGACCACAGCTTTTGTGACCACAGCGGTAGCTAATGCTCTGTCAAGTATTTCTGGTGGTAGCGTAACCTTTGCAAACGTAACCGTTTCTGGTGCGACTTCTCTGAACAACCTGACAGTTACAGGAACAACTACCCTTAACGGGCCAGTGAATGCTGACAACTCAACTGGTAGATTCCAGAACCTGATCCTAACCAAGCAGGCATCAAGTCTAACTTTCGTTTACACTGACGCAGGCAATCCTACGTTCCTCAAGACGAGATTAGATCCTTATGCGGCTCAGACACACAGCCTGAAGACAGACATCATTGTTAACGGAACTGTGGCTTCTGATGATACTACCATGTCCTTGACTGGTATTGGTAATAACGTTTTTGATTATGTTTACATCCGTGGTAACTCTGAGAAAGACACGGCCTCCCCACGACTGAAGGTTACGGGAACAACAGAGGTTGAAAACCTGCGTATTACAGGAACTGTGACAGGTCTCAGCCTAAGTGTTGACGGTATGGACATTGCCCCTAACTCCGTAACAACGGCAGATGGGGTGACAGTTGGTGGCGACCTCCAGGTCAATGGTAACTTCAACGTTGATAACATCTCTACGGAAACCATGACAGTCAATAATACTTTGACAGTTAATCAGGGTGCTGACCTGAAAGGTGCAACGGTCGGTGGTGCGTTTACCGCAGGTGGTCTGGTGACAATGACATCTGGATTCTCTACCCCCGTAAATGGAACAGTGGGAGGGACGCTCCAAGTGTCTGGTGTCTCCGATCTGACAGGTGGGTTCACTTCCGGTGCCAACTCTTCTGTAACAGGAAACCTGAACGTCAGCGGCGACGTTGACATGAACGGATCTTCTGGTACTACCACTGTCAACAACCTCGTTATCAGAGGGACTGTTACAGGTCTGACGGTTGATTTAACTGGTCAATCCATTAACGTTGCATCCTTGACAGCGACAGGTTCTGTAACCGCTGCAAACCTGACAGTTCAAGATTCGGCGGATTTGCCTGCTGCCAATATTGGATTCCTAACCTTGGTTGCTGAAGAAGTAGAAAGCTCCACAGCTTCATGGACACCAAGCGGGGAGTCGAACATTTACAATGTCTTGGTAGATGCAGACCTTACTATTGGTAAATGGCCTAGCCCTCCAAACGCATTCTCTGCGGTTATTTATCTTACCCAAGATGCAACTGGAGGACACACCGTTACTCTCGACCCGAACTACTTGGTTCTGAACAGCGAGACAATTAACCAAACAGCAGGTTCTGTGACTATTCTGCAATTGACCTATAACGGTGTTGCAGATGATGCAGGTGAACAAGGTGTTATCGACACAGTTATTGTCCGTCGCCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd0638f6f68f48f347be8ee0a1e2c101de4e12dc3cb85941189f8646f11e98eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6298
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of broad host-range of bacteriophages infecting Cronobacter sakazakii and its biocontrol potential in dairy products Li,H., Yang,X.-J., Zhu,X.-Y., Gao,L., Rao,S.-Q., Yuan,L. and Yang,Z.-Q. 2021 — GenBank